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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS16700 and ABIE41_RS16705 overlap by 4 nucleotides
ABIE41_RS16705 and ABIE41_RS16710 overlap by 4 nucleotides
ABIE41_RS16710 and ABIE41_RS16715 are separated by 70 nucleotides
ABIE41_RS16715 and ABIE41_RS16720 are separated by 95 nucleotides
ABIE41_RS16700: ABIE41_RS16700 - ABC transporter ATP-binding protein, at 3,436,634 to 3,437,614
_RS16700
ABIE41_RS16705: ABIE41_RS16705 - ABC transporter permease, at 3,437,611 to 3,438,519
_RS16705
ABIE41_RS16710: ABIE41_RS16710 - ABC transporter permease, at 3,438,516 to 3,439,493
_RS16710
ABIE41_RS16715: ABIE41_RS16715 - ABC transporter substrate-binding protein, at 3,439,564 to 3,441,177
_RS16715
ABIE41_RS16720: ABIE41_RS16720 - MurR/RpiR family transcriptional regulator, at 3,441,273 to 3,442,145
_RS16720
Group
Condition
ABIE41
_RS16700
ABIE41
_RS16705
ABIE41
_RS16710
ABIE41
_RS16715
ABIE41
_RS16720
carbon source
L-Fucose (C)
-0.3
-0.2
-0.1
-0.1
-0.4
carbon source
L-Arabinose (C)
-0.1
-0.4
+0.2
+0.1
-0.8
carbon source
D-Gluconic Acid (C)
+0.3
-0.4
-0.4
+0.0
-0.5
carbon source
D,L-Lactate (C)
+0.1
+0.1
-0.1
-0.1
-0.9
carbon source
D-Trehalose (C)
+0.2
+0.2
-0.3
-0.2
-0.6
carbon source
D-Tagatose (C)
+0.1
-0.7
+0.2
+0.2
-0.3
carbon source
L-Fucose (C)
-0.0
-0.2
+0.2
+0.2
-0.5
carbon source
Sucrose (C)
-0.4
+0.2
+0.0
+0.2
-0.3
r2a outgrowth control
R2A outgrowth control
+0.1
+0.1
-0.2
+0.2
-0.6
carbon source
D-Glucose-6-Phosphate (C)
+0.1
+0.3
+0.0
-0.0
-0.7
carbon source
D-Lactate (C)
-0.3
-0.0
+0.5
+0.2
-0.6
carbon source
D-Arabinose (C)
-0.2
-0.2
-0.2
+0.1
+0.5
stress
R2A with 3-octanone 5.31033333333333 mM
+0.1
+0.2
+0.2
+0.3
-0.7
stress
R2A with 3-octanone 5.31033333333333 mM
-0.2
+0.2
+0.3
+0.2
-0.4
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.2
-0.3
+0.4
+0.0
-0.2
carbon source
L-Rhamnose (C)
+0.1
+0.2
+0.3
+0.1
-0.6
carbon source
L-Histidine (C)
-0.2
+0.5
+0.3
+0.1
-0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.3
+0.1
-0.0
+0.2
+0.7
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.2
+0.5
+0.3
+0.2
-0.5
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.3
+0.2
-0.3
+0.1
+0.5
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
+0.4
+0.2
+0.2
-0.3
carbon source
D-Mannitol (C)
+0.5
+0.2
+0.1
+0.2
-0.3
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.5
-0.2
+0.0
+0.2
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
+0.4
+0.5
+0.3
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.3
+0.2
+0.4
+0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
+0.1
-0.0
+0.3
+0.0
+0.7
stress
R2A with 3-octanone 2.65516666666667 mM
-0.1
+0.7
+0.1
+0.0
+0.4
stress
R2A with 3-octanone 2.65516666666667 mM
+0.4
+0.3
+0.5
+0.2
-0.1
carbon source
a-Cyclodextrin (C)
+0.1
+0.2
-0.0
+0.3
+0.6
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.7
+0.1
+0.2
+0.2
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ABIE41_RS16710
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