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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS16630 and ABIE41_RS16635 are separated by 137 nucleotides
ABIE41_RS16635 and ABIE41_RS16640 are separated by 11 nucleotides
ABIE41_RS16640 and ABIE41_RS16645 are separated by 158 nucleotides
ABIE41_RS16645 and ABIE41_RS16650 are separated by 253 nucleotides
ABIE41_RS16630: ABIE41_RS16630 - cyclophilin-like fold protein, at 3,422,434 to 3,422,856
_RS16630
ABIE41_RS16635: ABIE41_RS16635 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 3,422,994 to 3,425,210
_RS16635
ABIE41_RS16640: ABIE41_RS16640 - (2Fe-2S)-binding protein, at 3,425,222 to 3,425,668
_RS16640
ABIE41_RS16645: ABIE41_RS16645 - LysR family transcriptional regulator, at 3,425,827 to 3,426,741
_RS16645
ABIE41_RS16650: ABIE41_RS16650 - twin-arginine translocation pathway signal, at 3,426,995 to 3,427,495
_RS16650
Group
Condition
ABIE41
_RS16630
ABIE41
_RS16635
ABIE41
_RS16640
ABIE41
_RS16645
ABIE41
_RS16650
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
-6.5
-6.3
-5.8
-0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.4
-6.8
-5.8
-5.2
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.0
-6.0
-5.3
-5.2
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
-5.6
-4.9
-3.4
+0.2
stress
R2A with 3-octanone 5.31033333333333 mM
-0.3
-0.5
-0.2
-0.3
-0.1
carbon source
pyruvate (C)
-0.2
-0.1
-0.5
+0.1
+0.0
carbon source
succinate (C)
+0.0
-0.2
-0.4
+0.1
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.4
-0.0
+0.1
+0.0
-0.3
carbon source
pyruvate (C)
-0.0
-0.0
+0.2
+0.2
-0.7
carbon source
D-Xylose (C)
+0.2
-0.1
-0.3
+0.0
-0.4
carbon source
D-Fructose (C)
-0.5
+0.3
+0.2
-0.1
-0.3
carbon source
D-Glucuronic Acid (C)
+0.4
+0.0
-0.5
-0.1
-0.2
carbon source
L-Arabinose (C)
-0.3
-0.4
+0.4
-0.3
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
-0.0
+0.4
-0.5
-0.1
-0.1
carbon source
m-Inositol (C)
+0.4
+0.1
-0.3
-0.2
-0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.4
+0.1
-0.6
+0.1
-0.1
carbon source
a-Cyclodextrin (C)
+0.2
+0.1
-0.4
+0.1
-0.1
r2a outgrowth control
R2A outgrowth control
-0.3
-0.0
-0.2
+0.2
+0.2
carbon source
D-Tagatose (C)
+0.3
+0.0
+0.2
-0.2
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.2
+0.2
+0.3
+0.0
-0.2
stress
R2A with 3-octanone 5.3129 mM
+0.1
-0.2
+0.4
-0.1
-0.1
carbon source
succinate (C)
+0.4
+0.1
+0.1
-0.1
-0.4
carbon source
D,L-Lactate (C)
+0.3
-0.2
+0.3
-0.1
-0.1
carbon source
NAG (C)
+0.4
-0.3
+0.3
+0.0
-0.2
dmso control
DMSO control
+0.3
+0.1
-0.0
-0.3
+0.2
stress
R2A with 3-octanone 5.3129 mM
+0.1
-0.1
+0.3
+0.1
-0.2
carbon source
D-Gluconic Acid (C)
+0.3
-0.0
+0.5
-0.1
-0.1
carbon source
L-Malic (C)
+0.4
-0.0
+0.3
+0.2
-0.1
carbon source
Sucrose (C)
+0.3
+0.2
+0.3
+0.0
+0.1
carbon source
Fumarate (C)
-0.0
+0.0
+0.5
+0.2
+0.3
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