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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS16415 and ABIE41_RS16420 are separated by 58 nucleotides
ABIE41_RS16420 and ABIE41_RS16425 are separated by 150 nucleotides
ABIE41_RS16425 and ABIE41_RS16430 are separated by 275 nucleotides
ABIE41_RS16430 and ABIE41_RS16435 are separated by 14 nucleotides
ABIE41_RS16415: ABIE41_RS16415 - LysR substrate-binding domain-containing protein, at 3,376,137 to 3,377,048
_RS16415
ABIE41_RS16420: ABIE41_RS16420 - LysR family transcriptional regulator, at 3,377,107 to 3,378,015
_RS16420
ABIE41_RS16425: ABIE41_RS16425 - mandelate racemase/muconate lactonizing enzyme family protein, at 3,378,166 to 3,379,329
_RS16425
ABIE41_RS16430: ABIE41_RS16430 - ROK family protein, at 3,379,605 to 3,380,708
_RS16430
ABIE41_RS16435: ABIE41_RS16435 - ABC transporter substrate-binding protein, at 3,380,723 to 3,382,288
_RS16435
Group
Condition
ABIE41
_RS16415
ABIE41
_RS16420
ABIE41
_RS16425
ABIE41
_RS16430
ABIE41
_RS16435
carbon source
succinate (C)
-0.5
-1.7
-0.2
-0.0
-0.1
carbon source
m-Inositol (C)
-0.8
-1.5
-0.2
+0.1
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.3
-1.6
+0.3
-0.2
+0.0
carbon source
D-Glucose-6-Phosphate (C)
-0.5
-0.9
+0.1
-0.4
-0.0
carbon source
L-Proline (C)
-0.0
-1.7
+0.1
+0.1
+0.0
carbon source
D-Sorbitol (C)
-0.4
-1.0
-0.0
+0.1
-0.1
stress
R2A with 3-octanone 5.3129 mM
+0.1
-1.0
-0.1
-0.2
-0.1
carbon source
Ying_all64 rep C; time point 1
-0.2
-1.4
+0.4
+0.1
-0.1
carbon source
a-Cyclodextrin (C)
-0.7
+0.1
-0.2
-0.2
-0.2
carbon source
D,L-Lactate (C)
-0.3
-0.3
-0.4
-0.2
+0.2
carbon source
D-Galactose (C)
-0.3
-0.7
-0.2
+0.2
+0.1
carbon source
Sucrose (C)
-0.7
-0.4
-0.1
+0.2
+0.1
carbon source
D-Glucuronic Acid (C)
+0.1
-1.3
+0.1
+0.2
+0.0
carbon source
L-Malic (C)
-0.1
-1.1
-0.0
+0.2
+0.1
carbon source
L-Glutamic (C)
-0.5
-0.3
-0.3
+0.4
-0.0
carbon source
Trisodium citrate (C)
-0.6
-0.7
+0.2
+0.3
+0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.4
-0.4
-0.2
-0.1
-0.3
carbon source
L-Arabinose (C)
-0.7
+0.7
-0.4
-0.1
+0.1
carbon source
Ying_all64 rep B; time point 1
-0.7
+0.3
+0.2
+0.1
-0.1
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
+0.5
-0.8
-0.0
+0.3
-0.1
carbon source
L-Proline (C)
-0.7
+0.6
+0.2
+0.1
+0.0
carbon source
D-Arabinose (C)
-0.3
+0.5
+0.1
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
-0.2
+0.9
-0.1
-0.0
-0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.6
+0.7
+0.0
+0.3
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.2
+0.7
-0.1
+0.1
-0.1
r2a no stress control
R2A no stress control
+0.1
+1.0
-0.1
+0.2
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
+0.3
+0.7
+0.0
+0.4
-0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.5
+0.6
+0.2
+0.0
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.5
+0.7
+0.2
+0.0
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
+1.0
-0.1
+0.3
+0.0
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