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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS16390 and ABIE41_RS16395 are separated by 459 nucleotides
ABIE41_RS16395 and ABIE41_RS16400 are separated by 11 nucleotides
ABIE41_RS16400 and ABIE41_RS16405 are separated by 63 nucleotides
ABIE41_RS16405 and ABIE41_RS16410 are separated by 84 nucleotides
ABIE41_RS16390: ABIE41_RS16390 - sugar phosphate isomerase/epimerase family protein, at 3,370,279 to 3,371,106
_RS16390
ABIE41_RS16395: ABIE41_RS16395 - TRAP transporter large permease, at 3,371,566 to 3,372,849
_RS16395
ABIE41_RS16400: ABIE41_RS16400 - TRAP transporter small permease, at 3,372,861 to 3,373,376
_RS16400
ABIE41_RS16405: ABIE41_RS16405 - TRAP transporter substrate-binding protein, at 3,373,440 to 3,374,435
_RS16405
ABIE41_RS16410: ABIE41_RS16410 - Gfo/Idh/MocA family oxidoreductase, at 3,374,520 to 3,375,878
_RS16410
Group
Condition
ABIE41
_RS16390
ABIE41
_RS16395
ABIE41
_RS16400
ABIE41
_RS16405
ABIE41
_RS16410
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
+0.1
-0.3
-0.2
-0.0
carbon source
L-Proline (C)
-0.2
+0.2
-0.4
+0.0
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
-0.5
-0.0
+0.2
-0.0
-0.1
carbon source
D-Alanine (C)
+0.1
-0.0
-0.6
+0.0
+0.1
carbon source
D-Trehalose (C)
+0.2
+0.1
-0.4
-0.2
-0.0
carbon source
D-Lactate (C)
+0.2
+0.2
-0.5
-0.2
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.1
-0.1
+0.2
-0.3
+0.1
carbon source
L-Arabinose (C)
-0.3
+0.2
+0.4
-0.2
-0.2
r2a outgrowth control
R2A outgrowth control
-0.3
+0.1
+0.2
-0.2
+0.2
carbon source
L-Histidine (C)
-0.1
+0.2
+0.2
-0.2
-0.2
carbon source
Ying_all64 rep B; time point 1
-0.3
-0.0
+0.3
+0.1
-0.1
carbon source
D-Mannitol (C)
-0.2
-0.1
+0.3
-0.1
+0.2
stress
R2A with 3-octanone 5.31033333333333 mM
-0.3
+0.2
+0.1
+0.2
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.3
-0.0
-0.1
+0.3
+0.2
r2a no stress control
R2A no stress control
+0.0
+0.3
-0.2
+0.1
+0.2
carbon source
casaminos (C)
-0.1
+0.2
+0.4
-0.1
+0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.2
+0.2
+0.4
-0.1
+0.1
carbon source
a-Cyclodextrin (C)
-0.1
+0.1
+0.6
+0.0
-0.0
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
-0.1
-0.1
+0.3
+0.3
+0.2
carbon source
D,L-Lactate (C)
+0.3
+0.1
+0.3
-0.2
+0.1
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.1
+0.2
+0.2
+0.1
carbon source
Xylitol (C)
-0.1
+0.2
+0.3
+0.0
+0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.2
-0.1
+0.3
+0.1
+0.1
carbon source
L-Proline (C)
+0.4
+0.0
-0.1
+0.3
+0.0
carbon source
D-Ribose (C)
+0.2
+0.1
+0.2
+0.0
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
+0.1
+0.3
+0.1
+0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.2
+0.1
+0.4
+0.2
+0.0
carbon source
D-Tagatose (C)
+0.2
+0.0
+0.5
-0.1
+0.2
carbon source
Trisodium citrate (C)
-0.0
+0.3
+0.5
+0.3
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.3
+0.1
+0.6
+0.2
+0.1
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ABIE41_RS16400
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