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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS14310 and ABIE41_RS14315 are separated by 192 nucleotides
ABIE41_RS14315 and ABIE41_RS14320 are separated by 73 nucleotides
ABIE41_RS14320 and ABIE41_RS14325 are separated by 7 nucleotides
ABIE41_RS14325 and ABIE41_RS14330 are separated by 101 nucleotides
ABIE41_RS14310: ABIE41_RS14310 - type VI secretion system baseplate subunit TssK, at 2,935,033 to 2,936,370
_RS14310
ABIE41_RS14315: ABIE41_RS14315 - PAAR domain-containing protein, at 2,936,563 to 2,937,063
_RS14315
ABIE41_RS14320: ABIE41_RS14320 - RidA family protein, at 2,937,137 to 2,937,496
_RS14320
ABIE41_RS14325: ABIE41_RS14325 - hypothetical protein, at 2,937,504 to 2,937,875
_RS14325
ABIE41_RS14330: ABIE41_RS14330 - type VI secretion system-associated FHA domain protein TagH, at 2,937,977 to 2,939,350
_RS14330
Group
Condition
ABIE41
_RS14310
ABIE41
_RS14315
ABIE41
_RS14320
ABIE41
_RS14325
ABIE41
_RS14330
carbon source
L-Histidine (C)
+0.3
N.D.
N.D.
-1.0
-0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
N.D.
N.D.
-0.5
-0.5
carbon source
pyruvate (C)
-0.1
N.D.
N.D.
-0.4
-0.4
carbon source
L-Fucose (C)
-0.5
N.D.
N.D.
-0.2
-0.0
carbon source
L-Malic (C)
-0.0
N.D.
N.D.
-0.3
-0.3
carbon source
D-Tagatose (C)
+0.1
N.D.
N.D.
-0.7
-0.1
carbon source
Sucrose (C)
-0.1
N.D.
N.D.
-0.4
-0.2
carbon source
L-Histidine (C)
+0.0
N.D.
N.D.
-0.3
-0.4
carbon source
D-Fructose (C)
-0.2
N.D.
N.D.
-0.2
-0.2
carbon source
Fumarate (C)
+0.0
N.D.
N.D.
-0.5
-0.1
stress
R2A with 3-octanone 2.65516666666667 mM
+0.1
N.D.
N.D.
-0.5
+0.1
carbon source
succinate (C)
+0.1
N.D.
N.D.
-0.6
+0.1
carbon source
D-Galactose (C)
+0.1
N.D.
N.D.
-0.5
+0.1
r2a outgrowth control
R2A outgrowth control
+0.1
N.D.
N.D.
-0.4
+0.0
carbon source
Ying_all64 rep C; time point 1
-0.1
N.D.
N.D.
+0.2
-0.4
carbon source
D-Arabinose (C)
-0.2
N.D.
N.D.
+0.2
-0.2
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.2
N.D.
N.D.
-0.4
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
+0.1
N.D.
N.D.
-0.4
+0.2
carbon source
D-Arabinose (C)
-0.1
N.D.
N.D.
-0.3
+0.4
carbon source
D-Sorbitol (C)
+0.1
N.D.
N.D.
-0.3
+0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.3
N.D.
N.D.
+0.2
+0.4
carbon source
D-Gluconic Acid (C)
+0.1
N.D.
N.D.
+0.3
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
N.D.
N.D.
+0.4
-0.1
dmso control
DMSO control
+0.2
N.D.
N.D.
+0.4
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
N.D.
N.D.
+0.4
-0.1
carbon source
L-Arabinose (C)
+0.3
N.D.
N.D.
+0.2
-0.1
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.2
N.D.
N.D.
+0.1
+0.3
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
N.D.
N.D.
+0.5
+0.0
stress
R2A with 3-octanone 5.3129 mM
+0.2
N.D.
N.D.
+0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
-0.2
N.D.
N.D.
+0.5
+0.3
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