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Gene
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Cofit
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS13620 and ABIE41_RS13625 are separated by 44 nucleotides
ABIE41_RS13625 and ABIE41_RS13630 overlap by 1 nucleotides
ABIE41_RS13630 and ABIE41_RS13635 are separated by 4 nucleotides
ABIE41_RS13635 and ABIE41_RS13640 are separated by 283 nucleotides
ABIE41_RS13620: ABIE41_RS13620 - ABC transporter ATP-binding protein, at 2,796,970 to 2,797,734
_RS13620
ABIE41_RS13625: ABIE41_RS13625 - ABC transporter ATP-binding protein, at 2,797,779 to 2,798,600
_RS13625
ABIE41_RS13630: ABIE41_RS13630 - high-affinity branched-chain amino acid ABC transporter permease LivM, at 2,798,600 to 2,799,992
_RS13630
ABIE41_RS13635: ABIE41_RS13635 - branched-chain amino acid ABC transporter permease LivH, at 2,799,997 to 2,800,914
_RS13635
ABIE41_RS13640: ABIE41_RS13640 - 4-hydroxyproline epimerase, at 2,801,198 to 2,802,208
_RS13640
Group
Condition
ABIE41
_RS13620
ABIE41
_RS13625
ABIE41
_RS13630
ABIE41
_RS13635
ABIE41
_RS13640
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.7
-0.9
-1.0
-0.7
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.9
-0.5
-0.9
-0.7
-0.1
carbon source
D-Ribose (C)
-0.9
-0.9
-0.4
-0.7
+0.0
carbon source
D-Tagatose (C)
-0.6
-1.0
-0.1
-1.1
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.7
-0.6
-0.7
-0.6
+0.1
carbon source
Ying_all64 rep A; time point 3
-0.6
-0.6
-0.6
-0.6
-0.1
carbon source
Ying_all64 rep C; time point 3
-0.7
-0.6
-0.5
-0.6
-0.1
carbon source
D-Arabinose (C)
-0.5
-0.5
-0.5
-0.6
-0.0
carbon source
Ying_all64 rep B; time point 3
-0.5
-0.3
-0.7
-0.5
+0.1
carbon source
D-Arabinose (C)
-0.7
-0.1
-0.5
-0.5
+0.1
carbon source
D-Tagatose (C)
-0.4
-0.5
-0.3
-0.5
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.3
-0.2
-0.5
-0.3
-0.2
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
-0.8
-0.5
-0.5
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.0
-0.8
-0.6
-0.1
-0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.4
-0.8
-0.4
+0.0
+0.0
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.6
-0.2
-0.3
-0.5
+0.0
carbon source
L-Fucose (C)
-0.3
-0.7
-0.4
-0.2
+0.1
carbon source
Fumarate (C)
-0.2
-0.8
-0.1
-0.3
-0.0
carbon source
D-Fructose (C)
-0.5
-0.9
-0.1
+0.0
-0.0
carbon source
succinate (C)
+0.1
-0.8
-0.2
-0.6
+0.0
carbon source
Xylitol (C)
-0.4
-0.7
-0.1
-0.3
+0.0
carbon source
L-Histidine (C)
-0.4
-0.7
-0.1
-0.3
+0.1
carbon source
succinate (C)
-0.6
-0.4
-0.2
-0.3
+0.1
carbon source
Sucrose (C)
-0.3
-0.6
-0.2
-0.3
+0.1
carbon source
D-Xylose (C)
+0.2
-0.7
-0.4
-0.3
+0.0
carbon source
L-Malic (C)
-0.4
-0.6
+0.1
-0.4
+0.2
carbon source
L-Malic (C)
-0.6
-0.2
-0.1
-0.3
+0.3
carbon source
D-Alanine (C)
+0.3
-0.7
+0.3
-0.1
-0.2
carbon source
L-Arabinose (C)
-0.5
-0.1
+0.2
-0.4
+0.4
carbon source
NAG (C)
-0.4
-0.6
+0.4
+0.4
+0.1
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ABIE41_RS13630
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