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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS12940 and ABIE41_RS12945 overlap by 4 nucleotides
ABIE41_RS12945 and ABIE41_RS12950 are separated by 178 nucleotides
ABIE41_RS12950 and ABIE41_RS12955 are separated by 154 nucleotides
ABIE41_RS12955 and ABIE41_RS12960 are separated by 84 nucleotides
ABIE41_RS12940: ABIE41_RS12940 - ABC transporter ATP-binding protein, at 2,646,800 to 2,647,687
_RS12940
ABIE41_RS12945: ABIE41_RS12945 - ABC transporter permease, at 2,647,684 to 2,648,472
_RS12945
ABIE41_RS12950: ABIE41_RS12950 - ABC transporter substrate-binding protein, at 2,648,651 to 2,649,682
_RS12950
ABIE41_RS12955: ABIE41_RS12955 - HWE histidine kinase domain-containing protein, at 2,649,837 to 2,650,925
_RS12955
ABIE41_RS12960: ABIE41_RS12960 - nuclear transport factor 2 family protein, at 2,651,010 to 2,651,417
_RS12960
Group
Condition
ABIE41
_RS12940
ABIE41
_RS12945
ABIE41
_RS12950
ABIE41
_RS12955
ABIE41
_RS12960
carbon source
m-Inositol (C)
-3.4
-0.3
-0.3
+0.1
+0.1
carbon source
D-Raffinose (C)
-3.3
-0.1
-0.4
-0.1
+0.0
carbon source
a-Cyclodextrin (C)
-3.3
+0.0
-0.1
-0.1
+0.1
carbon source
Trisodium citrate (C)
-1.5
-0.5
-0.6
+0.2
+0.1
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-1.8
+0.1
-0.1
-0.1
-0.1
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.9
+0.2
-0.3
-0.3
-0.2
carbon source
Tween 20 (C)
-1.1
-0.1
-0.1
+0.5
-0.4
carbon source
D-Lactate (C)
-1.0
+0.0
+0.5
-0.2
-0.4
carbon source
D-Glucuronic Acid (C)
-1.3
+0.0
-0.0
+0.5
+0.2
stress
R2A with 3-octanone 5.31033333333333 mM
+0.8
-0.2
+0.1
-0.6
-0.2
carbon source
D-Tagatose (C)
+1.1
-0.4
+0.3
-0.1
-0.4
carbon source
D-Gluconic Acid (C)
+1.6
-0.3
-0.1
-0.2
-0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
+1.5
+0.2
-0.4
+0.2
-0.6
r2a outgrowth control
R2A outgrowth control
+1.4
-0.1
-0.4
+0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
+1.4
+0.0
-0.1
-0.3
+0.2
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+1.5
-0.0
+0.0
-0.3
+0.1
carbon source
casaminos (C)
+1.2
-0.2
+0.2
+0.3
+0.0
carbon source
L-Proline (C)
+1.1
+0.1
-0.2
+0.3
+0.1
r2a no stress control
R2A no stress control
+1.9
-0.0
-0.3
+0.1
-0.1
carbon source
D-Arabinose (C)
+1.2
+0.0
+0.2
+0.6
-0.6
stress
R2A with 3-octanone 2.65516666666667 mM
+1.5
-0.2
+0.1
+0.2
-0.1
stress
R2A with 3-octanone 5.3129 mM
+1.3
+0.4
+0.1
-0.2
+0.0
stress
R2A with 3-octanone 5.3129 mM
+1.4
+0.1
-0.2
+0.2
+0.2
carbon source
Sucrose (C)
+1.2
-0.1
+0.1
+0.6
+0.1
carbon source
2-Deoxy-D-Ribose (C)
+1.0
-0.1
+0.3
+0.5
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+1.6
+0.0
-0.2
+0.5
-0.1
stress
R2A with 3-octanone 2.65516666666667 mM
+1.4
+0.2
+0.3
+0.3
-0.2
carbon source
D,L-Lactate (C)
+1.2
+0.1
+0.3
+0.3
+0.0
r2a no stress control
R2A no stress control
+2.0
+0.0
+0.1
-0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+1.6
+0.2
+0.0
+0.4
+0.0
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ABIE41_RS12945
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ABIE41_RS12950
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