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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS12555 and ABIE41_RS12560 overlap by 1 nucleotides
ABIE41_RS12560 and ABIE41_RS12565 overlap by 4 nucleotides
ABIE41_RS12565 and ABIE41_RS12570 overlap by 4 nucleotides
ABIE41_RS12570 and ABIE41_RS12575 are separated by 38 nucleotides
ABIE41_RS12555: ABIE41_RS12555 - division/cell wall cluster transcriptional repressor MraZ, at 2,571,253 to 2,571,726
_RS12555
ABIE41_RS12560: ABIE41_RS12560 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,571,726 to 2,572,784
_RS12560
ABIE41_RS12565: ABIE41_RS12565 - hypothetical protein, at 2,572,781 to 2,573,167
_RS12565
ABIE41_RS12570: ABIE41_RS12570 - penicillin-binding protein 2, at 2,573,164 to 2,574,924
_RS12570
ABIE41_RS12575: ABIE41_RS12575 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 2,574,963 to 2,576,417
_RS12575
Group
Condition
ABIE41
_RS12555
ABIE41
_RS12560
ABIE41
_RS12565
ABIE41
_RS12570
ABIE41
_RS12575
carbon source
a-Cyclodextrin (C)
+0.1
-5.5
N.D.
N.D.
N.D.
carbon source
D-Alanine (C)
-0.1
-2.7
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.2
-2.6
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
+0.4
-2.6
N.D.
N.D.
N.D.
r2a outgrowth control
R2A outgrowth control
-0.0
-2.2
N.D.
N.D.
N.D.
carbon source
L-Glutamic (C)
-0.5
-1.6
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-0.5
-1.4
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.3
-2.0
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
-0.4
-1.2
N.D.
N.D.
N.D.
carbon source
Fumarate (C)
-0.0
-1.4
N.D.
N.D.
N.D.
carbon source
D-Xylose (C)
-0.0
-1.4
N.D.
N.D.
N.D.
carbon source
Xylitol (C)
-0.9
-0.5
N.D.
N.D.
N.D.
carbon source
L-Fucose (C)
-0.6
-0.7
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.3
-1.5
N.D.
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
-1.4
N.D.
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.4
-0.8
N.D.
N.D.
N.D.
carbon source
D-Tagatose (C)
-0.8
-0.4
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
-0.2
-0.9
N.D.
N.D.
N.D.
carbon source
m-Inositol (C)
-0.2
-0.9
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-0.5
-0.7
N.D.
N.D.
N.D.
carbon source
D-Arabinose (C)
+0.2
-1.3
N.D.
N.D.
N.D.
r2a no stress control
R2A no stress control
+0.2
-1.2
N.D.
N.D.
N.D.
carbon source
L-Proline (C)
+0.1
-1.0
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
-0.7
+0.5
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-1.1
+1.1
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
-0.5
+1.0
N.D.
N.D.
N.D.
r2a no stress control
R2A no stress control
-0.3
+0.9
N.D.
N.D.
N.D.
carbon source
pyruvate (C)
-0.2
+1.1
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.2
+0.9
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
+1.2
N.D.
N.D.
N.D.
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