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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS12500 and ABIE41_RS12505 are separated by 16 nucleotides
ABIE41_RS12505 and ABIE41_RS12510 are separated by 97 nucleotides
ABIE41_RS12510 and ABIE41_RS12515 overlap by 4 nucleotides
ABIE41_RS12515 and ABIE41_RS12520 are separated by 31 nucleotides
ABIE41_RS12500: ABIE41_RS12500 - fumarylacetoacetate hydrolase family protein, at 2,560,963 to 2,561,749
_RS12500
ABIE41_RS12505: ABIE41_RS12505 - diguanylate cyclase, at 2,561,766 to 2,562,713
_RS12505
ABIE41_RS12510: ABIE41_RS12510 - ABC transporter permease, at 2,562,811 to 2,564,043
_RS12510
ABIE41_RS12515: ABIE41_RS12515 - ABC transporter ATP-binding protein, at 2,564,040 to 2,564,801
_RS12515
ABIE41_RS12520: ABIE41_RS12520 - efflux RND transporter periplasmic adaptor subunit, at 2,564,833 to 2,566,485
_RS12520
Group
Condition
ABIE41
_RS12500
ABIE41
_RS12505
ABIE41
_RS12510
ABIE41
_RS12515
ABIE41
_RS12520
carbon source
L-Arabinose (C)
-0.3
-0.5
+0.4
-5.6
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.7
-0.1
-0.9
+0.1
+0.0
carbon source
Ying_all64 rep A; time point 2
+0.2
-0.1
-0.2
-0.9
+0.0
carbon source
L-Glutamic (C)
-0.6
-0.1
+0.5
-0.7
-0.1
carbon source
D-Gluconic Acid (C)
-0.0
+0.1
+0.1
-1.0
-0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
-0.2
+0.3
-1.5
+0.3
carbon source
D-Mannitol (C)
+0.1
-0.4
+0.3
-0.7
+0.1
carbon source
D-Galactose (C)
-0.4
+0.0
+0.2
-0.6
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
-0.2
+0.6
-1.0
-0.0
carbon source
D-Sorbitol (C)
+0.2
-0.3
+0.2
-0.6
+0.1
carbon source
L-Fucose (C)
+0.1
-0.3
+0.4
-0.7
-0.0
carbon source
2-Deoxy-D-Ribose (C)
+0.2
-0.4
+0.3
-0.4
-0.1
carbon source
D-Alanine (C)
+0.4
-0.4
+0.3
-0.6
-0.1
carbon source
m-Inositol (C)
+0.4
-0.2
+0.3
-0.7
-0.2
carbon source
D-Arabinose (C)
+0.1
+0.1
+0.5
-0.7
-0.3
carbon source
D-Lactate (C)
-0.2
-0.6
+0.0
+0.5
+0.1
carbon source
casaminos (C)
+0.3
-0.2
+0.3
-0.5
+0.0
carbon source
D-Raffinose (C)
+0.7
+0.0
+0.4
-1.0
+0.0
stress
R2A with 3-octanone 2.65516666666667 mM
-0.4
-0.2
+0.1
+0.6
+0.1
carbon source
L-Rhamnose (C)
-0.3
-0.1
+0.1
+0.7
-0.1
carbon source
succinate (C)
-0.1
+0.1
-0.4
+0.9
-0.1
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.0
-0.0
-0.2
+1.0
+0.1
carbon source
pyruvate (C)
+0.1
-0.1
-0.3
+1.1
+0.0
carbon source
Fumarate (C)
+0.4
-0.3
+0.3
+0.9
-0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.0
-0.3
+0.4
+0.7
+0.3
carbon source
D-Tagatose (C)
+0.2
+0.2
+0.3
+0.7
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
+0.2
+0.2
+0.5
+0.3
stress
R2A with 3-octanone 5.3129 mM
+0.3
-0.3
+0.6
+0.7
+0.2
carbon source
NAG (C)
+0.4
+0.1
+0.5
+0.6
-0.0
stress
R2A with 3-octanone 5.31033333333333 mM
+0.0
+0.1
+0.6
+0.7
+0.2
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