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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS12215 and ABIE41_RS12220 are separated by 9 nucleotides
ABIE41_RS12220 and ABIE41_RS12225 overlap by 1 nucleotides
ABIE41_RS12225 and ABIE41_RS12230 are separated by 70 nucleotides
ABIE41_RS12230 and ABIE41_RS12235 are separated by 318 nucleotides
ABIE41_RS12215: ABIE41_RS12215 - GntR family transcriptional regulator, at 2,500,453 to 2,501,139
_RS12215
ABIE41_RS12220: ABIE41_RS12220 - PIN domain-containing protein, at 2,501,149 to 2,501,583
_RS12220
ABIE41_RS12225: ABIE41_RS12225 - type II toxin-antitoxin system Phd/YefM family antitoxin, at 2,501,583 to 2,501,825
_RS12225
ABIE41_RS12230: ABIE41_RS12230 - allophanate hydrolase, at 2,501,896 to 2,503,692
_RS12230
ABIE41_RS12235: ABIE41_RS12235 - isochorismatase family cysteine hydrolase, at 2,504,011 to 2,504,649
_RS12235
Group
Condition
ABIE41
_RS12215
ABIE41
_RS12220
ABIE41
_RS12225
ABIE41
_RS12230
ABIE41
_RS12235
carbon source
L-Arabinose (C)
+0.3
-0.5
-0.2
-0.1
-1.6
carbon source
D-Alanine (C)
+0.0
-0.5
-0.3
+0.1
-0.5
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
-0.3
-0.7
-0.0
-0.1
carbon source
a-Cyclodextrin (C)
-0.0
-0.2
-1.2
-0.0
+0.4
carbon source
D-Galactose (C)
+0.1
-0.3
-0.5
+0.1
-0.3
carbon source
D-Galactose (C)
+0.1
+0.2
-0.6
-0.3
-0.2
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.1
+0.3
-0.2
+0.1
-0.7
carbon source
D-Ribose (C)
+0.1
+0.5
-1.0
+0.2
-0.2
carbon source
D-Fructose (C)
+0.2
+0.6
-0.5
-0.3
-0.2
carbon source
NAG (C)
+0.0
+0.0
-0.4
-0.2
+0.7
carbon source
Trisodium citrate (C)
-0.4
+0.4
+0.1
-0.2
+0.1
carbon source
casaminos (C)
-0.0
+0.4
+0.4
-0.2
-0.2
carbon source
D-Arabinose (C)
+0.0
+0.5
-0.2
-0.3
+0.3
carbon source
D-Tagatose (C)
+0.1
+0.3
-0.6
+0.5
+0.1
carbon source
D-Raffinose (C)
+0.3
+0.6
-0.2
-0.2
-0.0
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.3
-0.4
+0.1
-0.0
+0.5
carbon source
NAG (C)
+0.1
+0.7
-0.6
-0.2
+0.6
carbon source
D-Mannose (C)
+0.2
+0.3
-0.4
+0.2
+0.2
stress
R2A with 3-octanone 5.3129 mM
-0.2
+0.3
+0.4
-0.1
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.3
+0.2
-0.1
+0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.2
+0.4
-0.1
+0.3
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
+0.2
+0.2
+0.1
+0.3
+0.5
carbon source
D-Lactate (C)
+0.1
+0.6
+0.4
+0.1
+0.2
r2a no stress control
R2A no stress control
+0.2
+0.4
+0.2
+0.3
+0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.2
+0.1
+0.3
+0.5
+0.4
stress
R2A with 3-octanone 5.3129 mM
+0.0
+0.3
+0.2
+0.5
+0.4
stress
R2A with 3-octanone 5.31033333333333 mM
+0.4
+0.6
-0.2
+0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.1
+0.4
+0.2
+0.2
+0.5
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.3
+0.2
+0.4
+0.4
+0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.3
+0.3
+0.3
+0.5
+0.4
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ABIE41_RS12225
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