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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS11375 and ABIE41_RS11380 overlap by 4 nucleotides
ABIE41_RS11380 and ABIE41_RS11385 are separated by 78 nucleotides
ABIE41_RS11385 and ABIE41_RS11390 overlap by 12 nucleotides
ABIE41_RS11390 and ABIE41_RS11395 are separated by 32 nucleotides
ABIE41_RS11375: ABIE41_RS11375 - methyl-accepting chemotaxis protein, at 2,335,689 to 2,337,686
_RS11375
ABIE41_RS11380: ABIE41_RS11380 - tRNA-binding protein, at 2,337,683 to 2,338,051
_RS11380
ABIE41_RS11385: ABIE41_RS11385 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 2,338,130 to 2,339,344
_RS11385
ABIE41_RS11390: ABIE41_RS11390 - ATP-binding protein, at 2,339,333 to 2,340,754
_RS11390
ABIE41_RS11395: ABIE41_RS11395 - response regulator transcription factor, at 2,340,787 to 2,341,515
_RS11395
Group
Condition
ABIE41
_RS11375
ABIE41
_RS11380
ABIE41
_RS11385
ABIE41
_RS11390
ABIE41
_RS11395
carbon source
D-Galactose (C)
-0.3
-0.3
-0.5
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
+0.1
-0.1
-0.9
N.D.
N.D.
carbon source
D-Alanine (C)
-0.2
+0.1
-0.6
N.D.
N.D.
carbon source
NAG (C)
+0.1
-0.1
-0.6
N.D.
N.D.
carbon source
Fumarate (C)
-0.1
+0.3
-0.6
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.0
+0.3
-0.7
N.D.
N.D.
carbon source
D-Maltose (C)
-0.3
+0.3
-0.3
N.D.
N.D.
carbon source
D-Fructose (C)
-0.2
-0.3
+0.3
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-0.1
+0.4
-0.4
N.D.
N.D.
carbon source
D-Galacturonic Acid (C)
-0.4
-0.4
+0.6
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.4
-0.2
-0.1
N.D.
N.D.
carbon source
L-Malic (C)
-0.3
+0.5
+0.0
N.D.
N.D.
carbon source
D-Alanine (C)
-0.2
-0.2
+0.7
N.D.
N.D.
carbon source
L-Fucose (C)
-0.3
+0.2
+0.5
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
+0.4
-0.2
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.3
+0.2
+0.5
N.D.
N.D.
r2a no stress control
R2A no stress control
+0.3
-0.2
+0.4
N.D.
N.D.
carbon source
m-Inositol (C)
-0.2
+0.3
+0.5
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.1
-0.2
+0.7
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.5
-0.0
+0.3
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
+0.3
+0.3
+0.2
N.D.
N.D.
carbon source
D-Glucuronic Acid (C)
-0.2
+0.1
+0.9
N.D.
N.D.
carbon source
L-Proline (C)
-0.0
+0.2
+0.6
N.D.
N.D.
carbon source
L-Rhamnose (C)
+0.1
+0.3
+0.4
N.D.
N.D.
carbon source
L-Malic (C)
+0.2
-0.1
+0.8
N.D.
N.D.
carbon source
succinate (C)
+0.1
+0.1
+0.6
N.D.
N.D.
carbon source
a-Cyclodextrin (C)
-0.0
+0.5
+0.4
N.D.
N.D.
carbon source
L-Arabinose (C)
-0.4
-0.2
+1.5
N.D.
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
+0.5
+0.1
+0.5
N.D.
N.D.
carbon source
D-Tagatose (C)
-0.0
+0.3
+0.9
N.D.
N.D.
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