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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS10985 and ABIE41_RS10990 are separated by 30 nucleotides
ABIE41_RS10990 and ABIE41_RS10995 are separated by 20 nucleotides
ABIE41_RS10995 and ABIE41_RS11000 are separated by 171 nucleotides
ABIE41_RS11000 and ABIE41_RS11005 are separated by 134 nucleotides
ABIE41_RS10985: ABIE41_RS10985 - response regulator, at 2,255,493 to 2,255,858
_RS10985
ABIE41_RS10990: ABIE41_RS10990 - chemotaxis protein CheW, at 2,255,889 to 2,256,392
_RS10990
ABIE41_RS10995: ABIE41_RS10995 - chemotaxis protein CheW, at 2,256,413 to 2,258,971
_RS10995
ABIE41_RS11000: ABIE41_RS11000 - histidine phosphotransferase ChpT, at 2,259,143 to 2,259,784
_RS11000
ABIE41_RS11005: ABIE41_RS11005 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,259,919 to 2,260,752
_RS11005
Group
Condition
ABIE41
_RS10985
ABIE41
_RS10990
ABIE41
_RS10995
ABIE41
_RS11000
ABIE41
_RS11005
carbon source
Trisodium citrate (C)
-0.7
-0.1
+0.0
N.D.
-3.0
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.8
-0.3
+0.1
N.D.
-2.1
carbon source
Ying_all64 rep A; time point 2
-0.9
-0.5
-0.0
N.D.
-1.5
carbon source
D,L-Lactate (C)
-0.5
+0.2
+0.2
N.D.
-2.5
stress
R2A with 3-octanone 5.31033333333333 mM
-0.4
-0.7
+0.4
N.D.
-1.9
dmso control
DMSO control
-0.1
-0.1
+0.3
N.D.
-2.6
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.1
-0.4
-0.1
N.D.
-2.0
carbon source
Fumarate (C)
-0.7
+0.4
+0.0
N.D.
-2.3
carbon source
Ying_all64 rep B; time point 2
-0.7
-0.1
+0.1
N.D.
-1.7
stress
R2A with 3-octanone 5.31033333333333 mM
-0.4
-0.4
+0.2
N.D.
-1.8
r2a no stress control
R2A no stress control
-0.3
+0.0
+0.1
N.D.
-2.1
carbon source
D-Alanine (C)
-0.8
+0.3
+0.2
N.D.
-1.9
carbon source
Ying_all64 rep C; time point 3
-0.2
-0.0
-0.0
N.D.
-1.9
carbon source
Ying_all64 rep A; time point 3
-0.4
+0.2
-0.1
N.D.
-1.8
stress
R2A with 1-octen-3-ol 0.493390333333333 mM
-0.3
-0.0
+0.2
N.D.
-2.0
carbon source
D-Ribose (C)
-0.2
-0.0
+0.2
N.D.
-2.0
carbon source
L-Malic (C)
-0.7
+0.5
-0.1
N.D.
-1.6
carbon source
D-Tagatose (C)
+0.1
-0.2
+0.2
N.D.
-1.8
carbon source
succinate (C)
-0.1
+0.1
+0.3
N.D.
-2.0
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
+0.0
+0.1
+0.2
N.D.
-1.9
carbon source
D-Fructose (C)
-0.3
-0.2
+0.3
N.D.
-1.4
dmso control
DMSO control
-0.3
+0.1
+0.3
N.D.
-1.7
carbon source
D-Mannitol (C)
-0.2
+0.6
-0.3
N.D.
-1.6
carbon source
L-Histidine (C)
+0.1
+0.3
+0.1
N.D.
-1.9
stress
R2A with 3-octanone 5.3129 mM
+0.4
-0.3
+0.2
N.D.
-1.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.2
+0.2
+0.1
N.D.
-1.7
carbon source
Fumarate (C)
+0.2
-0.2
+0.5
N.D.
-1.5
carbon source
D-Trehalose (C)
-0.2
+0.3
+0.3
N.D.
-1.4
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.5
-0.4
+0.1
N.D.
-1.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.8
-0.7
+0.5
N.D.
-1.4
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