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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS08850 and ABIE41_RS08855 are separated by 221 nucleotides
ABIE41_RS08855 and ABIE41_RS08860 are separated by 164 nucleotides
ABIE41_RS08860 and ABIE41_RS08865 are separated by 2 nucleotides
ABIE41_RS08865 and ABIE41_RS08870 are separated by 30 nucleotides
ABIE41_RS08850: ABIE41_RS08850 - GntR family transcriptional regulator, at 1,831,801 to 1,832,478
_RS08850
ABIE41_RS08855: ABIE41_RS08855 - sialic acid TRAP transporter substrate-binding protein SiaP, at 1,832,700 to 1,833,695
_RS08855
ABIE41_RS08860: ABIE41_RS08860 - TRAP transporter small permease, at 1,833,860 to 1,834,357
_RS08860
ABIE41_RS08865: ABIE41_RS08865 - TRAP transporter large permease, at 1,834,360 to 1,835,640
_RS08865
ABIE41_RS08870: ABIE41_RS08870 - SDR family NAD(P)-dependent oxidoreductase, at 1,835,671 to 1,836,420
_RS08870
Group
Condition
ABIE41
_RS08850
ABIE41
_RS08855
ABIE41
_RS08860
ABIE41
_RS08865
ABIE41
_RS08870
r2a outgrowth control
R2A outgrowth control
N.D.
-0.1
-0.1
-0.3
-0.8
carbon source
D-Gluconic Acid (C)
N.D.
+0.0
-0.7
-0.1
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 1
N.D.
-0.1
-0.2
-0.1
-0.7
carbon source
Sucrose (C)
N.D.
-0.1
-0.3
+0.1
-0.6
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.2
-0.9
-0.1
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
N.D.
+0.2
-0.2
-0.2
-0.4
carbon source
D-Raffinose (C)
N.D.
+0.1
-0.6
+0.1
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
+0.3
-0.2
-0.2
-0.5
carbon source
D-Fructose (C)
N.D.
+0.2
-0.9
+0.1
+0.1
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
+0.4
-0.6
-0.2
+0.0
carbon source
Tween 20 (C)
N.D.
-0.2
-0.4
+0.1
+0.3
carbon source
D,L-Lactate (C)
N.D.
-0.1
-0.5
+0.2
+0.2
carbon source
L-Arabinose (C)
N.D.
-0.2
-0.9
+0.5
+0.3
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
+0.4
-0.5
+0.1
-0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.4
-0.1
-0.2
-0.2
carbon source
m-Inositol (C)
N.D.
+0.2
-0.9
+0.2
+0.4
stress
R2A with 3-octanone 5.3129 mM
N.D.
+0.4
+0.2
+0.1
-0.7
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
-0.1
+0.2
-0.4
+0.3
carbon source
succinate (C)
N.D.
-0.1
-0.4
+0.1
+0.5
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
+0.4
+0.3
+0.1
-0.6
carbon source
D,L-Lactate (C)
N.D.
-0.3
+0.4
-0.1
+0.2
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
+0.3
+0.3
-0.1
-0.3
carbon source
D-Tagatose (C)
N.D.
-0.4
+0.1
+0.2
+0.4
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
+0.5
+0.1
-0.2
+0.2
carbon source
Fumarate (C)
N.D.
-0.2
+0.5
+0.2
+0.2
carbon source
L-Histidine (C)
N.D.
+0.0
+0.6
+0.1
+0.3
carbon source
L-Proline (C)
N.D.
+0.0
+0.6
+0.1
+0.3
carbon source
Ying_all64 rep C; time point 1
N.D.
+0.1
+0.3
-0.0
+0.7
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
+0.3
+0.2
+0.2
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.7
-0.1
-0.0
+0.6
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ABIE41_RS08860
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