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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS08775 and ABIE41_RS08780 are separated by 162 nucleotides
ABIE41_RS08780 and ABIE41_RS08785 are separated by 125 nucleotides
ABIE41_RS08785 and ABIE41_RS08790 are separated by 345 nucleotides
ABIE41_RS08790 and ABIE41_RS08795 overlap by 47 nucleotides
ABIE41_RS08775: ABIE41_RS08775 - phosphoglycerate dehydrogenase, at 1,818,299 to 1,819,888
_RS08775
ABIE41_RS08780: ABIE41_RS08780 - phosphoserine transaminase, at 1,820,051 to 1,821,229
_RS08780
ABIE41_RS08785: ABIE41_RS08785 - Swt1 family HEPN domain-containing protein, at 1,821,355 to 1,821,909
_RS08785
ABIE41_RS08790: ABIE41_RS08790 - hypothetical protein, at 1,822,255 to 1,822,425
_RS08790
ABIE41_RS08795: ABIE41_RS08795 - DUF5343 domain-containing protein, at 1,822,379 to 1,822,576
_RS08795
Group
Condition
ABIE41
_RS08775
ABIE41
_RS08780
ABIE41
_RS08785
ABIE41
_RS08790
ABIE41
_RS08795
carbon source
Trisodium citrate (C)
-1.4
N.D.
-1.0
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
-2.0
N.D.
-0.1
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-1.8
N.D.
-0.1
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-1.0
N.D.
-0.4
N.D.
N.D.
carbon source
NAG (C)
-1.2
N.D.
-0.2
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-1.3
N.D.
+0.0
N.D.
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
N.D.
-1.1
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
-1.0
N.D.
-0.1
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
-1.3
N.D.
+0.2
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-0.7
N.D.
-0.5
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 3
-1.1
N.D.
+0.0
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-1.4
N.D.
+0.4
N.D.
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
-1.1
N.D.
+0.4
N.D.
N.D.
r2a outgrowth control
R2A outgrowth control
-1.0
N.D.
+0.3
N.D.
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-1.1
N.D.
+0.5
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
-1.2
N.D.
+0.6
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.8
N.D.
+0.4
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
+0.4
N.D.
-0.9
N.D.
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
-1.3
N.D.
+0.9
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
-0.7
N.D.
+0.3
N.D.
N.D.
carbon source
D,L-Lactate (C)
-0.7
N.D.
+0.3
N.D.
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
-0.8
N.D.
+0.6
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
-1.1
N.D.
+1.0
N.D.
N.D.
carbon source
D-Alanine (C)
+0.6
N.D.
-0.6
N.D.
N.D.
carbon source
L-Histidine (C)
+0.6
N.D.
-0.5
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
-0.4
N.D.
+0.6
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
-0.4
N.D.
+0.9
N.D.
N.D.
carbon source
L-Glutamic (C)
+0.7
N.D.
+0.3
N.D.
N.D.
carbon source
m-Inositol (C)
+0.5
N.D.
+0.6
N.D.
N.D.
carbon source
a-Cyclodextrin (C)
+0.6
N.D.
+0.5
N.D.
N.D.
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