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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS08110 and ABIE41_RS08115 are separated by 319 nucleotides
ABIE41_RS08115 and ABIE41_RS08120 are separated by 13 nucleotides
ABIE41_RS08120 and ABIE41_RS08125 overlap by 4 nucleotides
ABIE41_RS08125 and ABIE41_RS08130 are separated by 91 nucleotides
ABIE41_RS08110: ABIE41_RS08110 - type I secretion system permease/ATPase, at 1,675,523 to 1,677,247
_RS08110
ABIE41_RS08115: ABIE41_RS08115 - dihydroorotase, at 1,677,567 to 1,678,922
_RS08115
ABIE41_RS08120: ABIE41_RS08120 - amidohydrolase family protein, at 1,678,936 to 1,680,384
_RS08120
ABIE41_RS08125: ABIE41_RS08125 - ornithine cyclodeaminase family protein, at 1,680,381 to 1,681,373
_RS08125
ABIE41_RS08130: ABIE41_RS08130 - ABC transporter substrate-binding protein, at 1,681,465 to 1,682,508
_RS08130
Group
Condition
ABIE41
_RS08110
ABIE41
_RS08115
ABIE41
_RS08120
ABIE41
_RS08125
ABIE41
_RS08130
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
-0.3
-0.3
-0.2
+0.0
carbon source
D-Mannitol (C)
-0.0
-0.5
+0.1
-0.4
-0.2
stress
R2A with 3-octanone 5.3129 mM
-0.7
-0.0
-0.1
+0.0
-0.1
carbon source
m-Inositol (C)
+0.1
-0.2
-0.5
-0.2
-0.0
carbon source
D-Maltose (C)
-0.3
-0.3
-0.2
+0.1
+0.0
carbon source
D-Lactate (C)
+0.1
+0.1
-0.4
-0.5
-0.0
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.5
+0.1
+0.1
-0.3
-0.2
carbon source
L-Arabinose (C)
-0.6
-0.2
+0.0
+0.2
+0.1
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.6
+0.2
+0.0
+0.2
-0.2
carbon source
a-Cyclodextrin (C)
-0.1
+0.3
-0.4
+0.0
-0.1
carbon source
D-Alanine (C)
+0.3
+0.0
-0.4
+0.1
-0.1
carbon source
Ying_all64 rep C; time point 1
-0.2
+0.5
-0.3
-0.1
-0.0
carbon source
L-Glutamic (C)
+0.4
+0.3
-0.3
-0.5
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
+0.6
-0.3
-0.4
+0.1
+0.1
r2a outgrowth control
R2A outgrowth control
+0.1
-0.2
-0.5
+0.2
+0.3
carbon source
D-Galactose (C)
+0.4
+0.1
+0.3
-0.5
-0.1
carbon source
NAG (C)
+0.1
+0.2
-0.3
+0.3
-0.2
carbon source
D,L-Lactate (C)
-0.6
+0.2
+0.2
+0.3
+0.0
carbon source
D-Ribose (C)
-0.1
+0.2
+0.5
-0.1
-0.1
carbon source
L-Histidine (C)
+0.3
+0.4
-0.4
+0.1
-0.0
stress
R2A with 3-octanone 2.65516666666667 mM
+0.2
+0.1
-0.3
+0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.2
+0.3
-0.2
+0.3
-0.1
carbon source
L-Rhamnose (C)
+0.5
+0.2
+0.1
-0.2
-0.0
carbon source
D-Fructose (C)
+0.3
+0.3
-0.0
+0.2
-0.1
carbon source
D-Glucose-6-Phosphate (C)
+0.1
+0.6
+0.1
-0.0
-0.1
carbon source
succinate (C)
-0.5
+0.6
+0.4
+0.3
+0.0
stress
R2A with 3-octanone 5.3129 mM
+0.4
+0.5
-0.2
+0.2
-0.0
carbon source
D-Tagatose (C)
+0.2
+0.2
+0.4
+0.2
+0.1
carbon source
D-Xylose (C)
+0.3
+0.2
+0.5
+0.1
-0.0
carbon source
L-Fucose (C)
+0.2
+0.5
+0.4
+0.1
+0.2
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