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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS07920 and ABIE41_RS07925 are separated by 22 nucleotides
ABIE41_RS07925 and ABIE41_RS07930 are separated by 296 nucleotides
ABIE41_RS07930 and ABIE41_RS07935 are separated by 146 nucleotides
ABIE41_RS07935 and ABIE41_RS07940 overlap by 4 nucleotides
ABIE41_RS07920: ABIE41_RS07920 - Lrp/AsnC ligand binding domain-containing protein, at 1,629,390 to 1,629,845
_RS07920
ABIE41_RS07925: ABIE41_RS07925 - TerC family protein, at 1,629,868 to 1,630,878
_RS07925
ABIE41_RS07930: ABIE41_RS07930 - ABC transporter substrate-binding protein, at 1,631,175 to 1,632,236
_RS07930
ABIE41_RS07935: ABIE41_RS07935 - ABC transporter ATP-binding protein, at 1,632,383 to 1,633,177
_RS07935
ABIE41_RS07940: ABIE41_RS07940 - ABC transporter permease, at 1,633,174 to 1,633,944
_RS07940
Group
Condition
ABIE41
_RS07920
ABIE41
_RS07925
ABIE41
_RS07930
ABIE41
_RS07935
ABIE41
_RS07940
carbon source
D-Mannitol (C)
+0.0
+0.0
-0.3
-0.6
-0.6
carbon source
D-Gluconic Acid (C)
-0.0
-0.3
-0.2
-0.5
-0.2
carbon source
L-Malic (C)
+0.1
+0.4
-0.4
-0.8
-0.4
carbon source
D,L-Lactate (C)
+0.1
-0.0
-0.2
-0.6
-0.2
carbon source
casaminos (C)
-0.2
+0.0
-0.1
-0.4
-0.2
carbon source
D-Galacturonic Acid (C)
+0.0
+0.0
-0.4
-0.5
+0.0
carbon source
L-Malic (C)
+0.2
+0.2
-0.4
-0.7
-0.1
carbon source
D-Ribose (C)
+0.2
-0.2
-0.2
-0.5
-0.1
carbon source
L-Fucose (C)
+0.2
+0.2
-0.3
-0.3
-0.3
carbon source
D-Lactate (C)
-0.3
+0.4
-0.2
-0.1
-0.4
carbon source
D-Maltose (C)
-0.0
+0.0
-0.2
-0.5
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
-0.3
+0.1
-0.1
-0.1
carbon source
D-Raffinose (C)
+0.2
-0.1
-0.4
-0.3
+0.1
dmso control
DMSO control
-0.1
-0.2
+0.2
-0.4
+0.0
carbon source
D-Xylose (C)
+0.2
+0.1
+0.0
-0.7
-0.1
carbon source
NAG (C)
+0.1
-0.1
-0.3
+0.2
-0.3
carbon source
D-Mannose (C)
-0.1
-0.1
-0.4
+0.5
-0.2
dmso control
DMSO control
-0.3
-0.1
+0.2
-0.2
+0.1
carbon source
L-Histidine (C)
+0.1
+0.2
-0.2
-0.4
-0.0
carbon source
D-Tagatose (C)
-0.4
-0.1
-0.2
+0.4
-0.0
r2a no stress control
R2A no stress control
-0.1
-0.3
+0.1
-0.2
+0.2
carbon source
Trisodium citrate (C)
+0.2
+0.1
-0.7
+0.5
-0.2
carbon source
pyruvate (C)
-0.2
+0.0
-0.3
+0.3
+0.1
carbon source
L-Rhamnose (C)
+0.3
-0.0
-0.3
+0.2
-0.1
carbon source
a-Cyclodextrin (C)
+0.3
+0.2
+0.1
-0.3
-0.3
carbon source
L-Proline (C)
+0.1
+0.1
-0.2
+0.5
-0.4
carbon source
Fumarate (C)
+0.2
+0.1
-0.1
+0.3
-0.3
carbon source
L-Histidine (C)
-0.2
+0.2
-0.3
+0.3
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.3
+0.2
-0.0
+0.3
+0.0
carbon source
Sucrose (C)
+0.4
+0.3
+0.1
+0.4
-0.1
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