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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS05960 and ABIE41_RS05965 are separated by 117 nucleotides
ABIE41_RS05965 and ABIE41_RS05970 are separated by 79 nucleotides
ABIE41_RS05970 and ABIE41_RS05975 are separated by 18 nucleotides
ABIE41_RS05975 and ABIE41_RS05980 are separated by 89 nucleotides
ABIE41_RS05960: ABIE41_RS05960 - ABC transporter substrate-binding protein, at 1,229,311 to 1,230,642
_RS05960
ABIE41_RS05965: ABIE41_RS05965 - ABC transporter ATP-binding protein, at 1,230,760 to 1,231,608
_RS05965
ABIE41_RS05970: ABIE41_RS05970 - AMP-binding protein, at 1,231,688 to 1,232,920
_RS05970
ABIE41_RS05975: ABIE41_RS05975 - hypothetical protein, at 1,232,939 to 1,233,130
_RS05975
ABIE41_RS05980: ABIE41_RS05980 - uracil-DNA glycosylase, at 1,233,220 to 1,233,918
_RS05980
Group
Condition
ABIE41
_RS05960
ABIE41
_RS05965
ABIE41
_RS05970
ABIE41
_RS05975
ABIE41
_RS05980
carbon source
L-Arabinose (C)
-0.1
-0.1
-0.6
-0.5
-3.1
carbon source
L-Malic (C)
-0.2
+0.1
+0.1
+0.0
-3.6
carbon source
NAG (C)
+0.1
+0.2
-0.0
-0.2
-3.5
carbon source
Ying_all64 rep C; time point 3
+0.2
+0.3
-0.7
-0.1
-3.0
carbon source
D-Gluconic Acid (C)
+0.0
+0.1
+0.2
-0.2
-3.4
carbon source
D-Tagatose (C)
-0.0
-0.1
-0.1
+0.2
-3.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.0
+0.1
+0.0
-0.1
-2.8
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
+0.0
-1.2
+0.3
-1.8
carbon source
Ying_all64 rep C; time point 1
-0.0
+0.1
-0.7
+0.1
-2.0
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-0.0
-0.9
-0.4
-1.1
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
+0.0
-0.9
+0.1
-1.6
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.1
+0.1
-0.7
+0.1
-1.6
carbon source
Fumarate (C)
-0.2
-0.1
-0.1
+0.1
-1.8
carbon source
Fumarate (C)
-0.1
-0.1
-0.2
-0.2
-1.6
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
-0.1
-1.2
+0.0
-0.8
carbon source
D-Ribose (C)
-0.1
+0.1
-0.2
-0.4
-1.4
control
NP
-0.0
+0.0
-0.4
-0.1
-1.4
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.1
+0.1
-0.1
+0.1
-2.0
stress
R2A with 3-octanone 5.3129 mM
+0.0
-0.2
+0.2
-0.1
-1.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
-0.1
+0.0
-0.1
+0.3
-1.9
carbon source
D-Raffinose (C)
-0.0
-0.0
+0.1
-0.1
-1.6
stress
R2A with 3-octanone 5.3129 mM
-0.1
+0.3
+0.2
+0.5
-2.6
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.1
-0.0
+0.3
+0.2
-2.0
carbon source
Ying_all64 rep B; time point 2
+0.1
+0.1
-0.6
+0.3
-1.3
carbon source
Ying_all64 rep A; time point 3
+0.1
+0.1
-0.8
-0.2
-0.5
carbon source
Ying_all64 rep B; time point 3
+0.2
+0.2
-0.7
-0.1
-1.0
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
-0.2
+0.0
+0.3
-1.2
carbon source
succinate (C)
+0.1
-0.1
-0.6
-0.1
+1.4
carbon source
Trisodium citrate (C)
-0.4
-0.1
+0.1
-0.1
+1.5
carbon source
a-Cyclodextrin (C)
-0.1
-0.0
+0.4
-0.2
+2.1
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