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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS05230 and ABIE41_RS05235 are separated by 112 nucleotides
ABIE41_RS05235 and ABIE41_RS05240 are separated by 142 nucleotides
ABIE41_RS05240 and ABIE41_RS05245 are separated by 6 nucleotides
ABIE41_RS05245 and ABIE41_RS05250 overlap by 4 nucleotides
ABIE41_RS05230: ABIE41_RS05230 - tRNA-Arg, at 1,082,671 to 1,082,747
_RS05230
ABIE41_RS05235: ABIE41_RS05235 - LacI family DNA-binding transcriptional regulator, at 1,082,860 to 1,083,891
_RS05235
ABIE41_RS05240: ABIE41_RS05240 - ABC transporter substrate-binding protein, at 1,084,034 to 1,085,311
_RS05240
ABIE41_RS05245: ABIE41_RS05245 - sugar ABC transporter permease, at 1,085,318 to 1,086,331
_RS05245
ABIE41_RS05250: ABIE41_RS05250 - carbohydrate ABC transporter permease, at 1,086,328 to 1,087,380
_RS05250
Group
Condition
ABIE41
_RS05230
ABIE41
_RS05235
ABIE41
_RS05240
ABIE41
_RS05245
ABIE41
_RS05250
carbon source
a-Cyclodextrin (C)
N.D.
-0.5
-0.1
-0.0
-0.2
r2a outgrowth control
R2A outgrowth control
N.D.
-0.4
-0.0
-0.1
-0.2
carbon source
pyruvate (C)
N.D.
-0.4
-0.2
-0.1
+0.1
carbon source
2-Deoxy-D-Ribose (C)
N.D.
-0.3
-0.0
+0.2
+0.1
carbon source
L-Fucose (C)
N.D.
+0.3
+0.0
-0.2
-0.1
carbon source
succinate (C)
N.D.
+0.3
+0.0
+0.1
-0.2
carbon source
D-Maltose (C)
N.D.
+0.1
+0.1
+0.2
-0.2
carbon source
D-Gluconic Acid (C)
N.D.
+0.2
+0.1
+0.2
-0.2
carbon source
L-Arabinose (C)
N.D.
+0.5
-0.0
+0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
N.D.
-0.0
+0.1
+0.2
+0.3
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
+0.2
+0.1
+0.3
carbon source
Fumarate (C)
N.D.
+0.3
+0.1
+0.1
+0.0
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.2
+0.4
+0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
N.D.
+0.1
+0.1
+0.1
+0.4
carbon source
Fumarate (C)
N.D.
+0.0
+0.1
+0.2
+0.3
carbon source
D-Glucuronic Acid (C)
N.D.
+0.1
+0.1
+0.2
+0.2
carbon source
NAG (C)
N.D.
+0.1
+0.3
+0.3
+0.1
carbon source
L-Rhamnose (C)
N.D.
+0.3
+0.1
+0.2
+0.1
carbon source
D-Galactose (C)
N.D.
-0.0
+0.3
+0.1
+0.3
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
N.D.
+0.3
+0.0
+0.1
+0.3
carbon source
D-Xylose (C)
N.D.
+0.4
+0.1
+0.1
+0.1
carbon source
Xylitol (C)
N.D.
+0.1
+0.1
+0.2
+0.3
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
+0.3
+0.1
+0.1
+0.2
carbon source
D-Tagatose (C)
N.D.
+0.4
-0.1
+0.2
+0.4
carbon source
Trisodium citrate (C)
N.D.
+0.4
+0.0
+0.2
+0.2
carbon source
Sucrose (C)
N.D.
+0.3
+0.2
+0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.3133 mM
N.D.
+0.2
+0.2
+0.2
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
+0.3
+0.3
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
N.D.
+0.2
+0.2
+0.2
+0.4
carbon source
D-Lactate (C)
N.D.
+0.6
+0.2
+0.1
+0.1
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