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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS04670 and ABIE41_RS04675 are separated by 218 nucleotides
ABIE41_RS04675 and ABIE41_RS04680 are separated by 55 nucleotides
ABIE41_RS04680 and ABIE41_RS04685 are separated by 69 nucleotides
ABIE41_RS04685 and ABIE41_RS04690 are separated by 39 nucleotides
ABIE41_RS04670: ABIE41_RS04670 - protoporphyrinogen oxidase HemJ, at 971,871 to 972,293
_RS04670
ABIE41_RS04675: ABIE41_RS04675 - transcription termination factor Rho, at 972,512 to 973,777
_RS04675
ABIE41_RS04680: ABIE41_RS04680 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 973,833 to 975,146
_RS04680
ABIE41_RS04685: ABIE41_RS04685 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 975,216 to 977,099
_RS04685
ABIE41_RS04690: ABIE41_RS04690 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 977,139 to 977,786
_RS04690
Group
Condition
ABIE41
_RS04670
ABIE41
_RS04675
ABIE41
_RS04680
ABIE41
_RS04685
ABIE41
_RS04690
carbon source
D-Raffinose (C)
N.D.
N.D.
-1.7
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
N.D.
N.D.
-1.5
N.D.
N.D.
carbon source
D-Sorbitol (C)
N.D.
N.D.
-1.3
N.D.
N.D.
carbon source
D-Galactose (C)
N.D.
N.D.
-1.2
N.D.
N.D.
carbon source
D-Arabinose (C)
N.D.
N.D.
-1.0
N.D.
N.D.
carbon source
D-Tagatose (C)
N.D.
N.D.
-0.9
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
N.D.
-0.8
N.D.
N.D.
carbon source
D-Arabinose (C)
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
L-Proline (C)
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
m-Inositol (C)
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
NAG (C)
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
D-Glucuronic Acid (C)
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
L-Glutamic (C)
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 2
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
D-Fructose (C)
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
D-Mannitol (C)
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 1
N.D.
N.D.
-0.5
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
N.D.
N.D.
+0.5
N.D.
N.D.
dmso control
DMSO control
N.D.
N.D.
+0.5
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
N.D.
N.D.
+0.5
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
N.D.
N.D.
+0.6
N.D.
N.D.
carbon source
m-Inositol (C)
N.D.
N.D.
+0.7
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
N.D.
N.D.
+0.7
N.D.
N.D.
r2a no stress control
R2A no stress control
N.D.
N.D.
+0.7
N.D.
N.D.
carbon source
L-Arabinose (C)
N.D.
N.D.
+0.9
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+0.9
N.D.
N.D.
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