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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS04100 and ABIE41_RS04105 are separated by 18 nucleotides
ABIE41_RS04105 and ABIE41_RS04110 are separated by 149 nucleotides
ABIE41_RS04110 and ABIE41_RS04115 are separated by 131 nucleotides
ABIE41_RS04115 and ABIE41_RS04120 are separated by 222 nucleotides
ABIE41_RS04100: ABIE41_RS04100 - sensor histidine kinase, at 846,110 to 847,756
_RS04100
ABIE41_RS04105: ABIE41_RS04105 - transglutaminase family protein, at 847,775 to 848,653
_RS04105
ABIE41_RS04110: ABIE41_RS04110 - hypothetical protein, at 848,803 to 849,081
_RS04110
ABIE41_RS04115: ABIE41_RS04115 - ABC transporter ATP-binding protein/permease, at 849,213 to 851,021
_RS04115
ABIE41_RS04120: ABIE41_RS04120 - Crp/Fnr family transcriptional regulator, at 851,244 to 852,002
_RS04120
Group
Condition
ABIE41
_RS04100
ABIE41
_RS04105
ABIE41
_RS04110
ABIE41
_RS04115
ABIE41
_RS04120
carbon source
L-Arabinose (C)
N.D.
-0.2
-1.0
+0.4
-0.7
carbon source
L-Glutamic (C)
N.D.
-0.2
-0.9
+0.1
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
+0.0
-1.1
+0.1
-0.2
carbon source
D-Galactose (C)
N.D.
+0.1
-0.9
+0.1
-0.2
carbon source
D-Arabinose (C)
N.D.
+0.1
-1.1
+0.2
-0.2
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
-0.4
+0.1
+0.3
-0.8
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
N.D.
-0.1
-0.9
+0.4
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
N.D.
-0.1
-0.8
+0.3
-0.1
carbon source
Fumarate (C)
N.D.
+0.2
-1.3
+0.4
+0.2
carbon source
D-Gluconic Acid (C)
N.D.
+0.2
-0.8
+0.3
-0.0
carbon source
D-Galacturonic Acid (C)
N.D.
+0.3
-1.1
+0.2
+0.3
carbon source
Ying_all64 rep A; time point 3
N.D.
+0.1
-0.7
+0.3
-0.1
carbon source
D-Glucuronic Acid (C)
N.D.
+0.3
-0.7
+0.3
+0.2
carbon source
L-Proline (C)
N.D.
+0.3
-0.3
+0.5
-0.3
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
+0.3
+0.6
+0.0
-0.4
carbon source
m-Inositol (C)
N.D.
-0.4
+0.7
+0.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
N.D.
-0.0
+0.7
+0.2
-0.3
carbon source
a-Cyclodextrin (C)
N.D.
+0.5
+0.3
+0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
N.D.
-0.1
+0.2
+0.2
+0.7
carbon source
m-Inositol (C)
N.D.
+0.3
-0.3
+0.1
+0.9
stress
R2A with 3-octanone 2.65516666666667 mM
N.D.
-0.0
+0.7
+0.0
+0.4
carbon source
L-Histidine (C)
N.D.
+0.1
+0.9
-0.1
+0.2
r2a no stress control
R2A no stress control
N.D.
-0.0
+0.7
+0.1
+0.3
carbon source
2-Deoxy-D-Ribose (C)
N.D.
+0.4
+0.2
+0.4
+0.2
carbon source
succinate (C)
N.D.
+0.4
+0.6
+0.1
+0.1
r2a no stress control
R2A no stress control
N.D.
+0.0
+0.9
+0.2
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
N.D.
+0.2
+0.6
+0.3
+0.2
carbon source
D-Alanine (C)
N.D.
+0.5
+0.1
+0.2
+0.6
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.2
+1.5
+0.2
+0.1
carbon source
L-Malic (C)
N.D.
+0.3
+0.9
+0.3
+0.2
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