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Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS03695 and ABIE41_RS03700 are separated by 30 nucleotides
ABIE41_RS03700 and ABIE41_RS03705 overlap by 4 nucleotides
ABIE41_RS03705 and ABIE41_RS03710 are separated by 137 nucleotides
ABIE41_RS03710 and ABIE41_RS03715 are separated by 148 nucleotides
ABIE41_RS03695: ABIE41_RS03695 - CpaD family pilus assembly protein, at 775,142 to 775,882
_RS03695
ABIE41_RS03700: ABIE41_RS03700 - type II and III secretion system protein family protein, at 775,913 to 777,358
_RS03700
ABIE41_RS03705: ABIE41_RS03705 - Flp pilus assembly protein CpaB, at 777,355 to 778,134
_RS03705
ABIE41_RS03710: ABIE41_RS03710 - prepilin peptidase, at 778,272 to 778,784
_RS03710
ABIE41_RS03715: ABIE41_RS03715 - Flp family type IVb pilin, at 778,933 to 779,106
_RS03715
Group
Condition
ABIE41
_RS03695
ABIE41
_RS03700
ABIE41
_RS03705
ABIE41
_RS03710
ABIE41
_RS03715
carbon source
L-Rhamnose (C)
-0.2
-0.3
-1.2
-0.9
N.D.
carbon source
Fumarate (C)
+0.3
-0.4
-1.6
-0.8
N.D.
carbon source
L-Arabinose (C)
+0.0
-0.0
-2.6
+0.2
N.D.
carbon source
D-Ribose (C)
+0.3
-0.3
-2.1
-0.2
N.D.
carbon source
L-Proline (C)
+0.3
-0.2
-1.0
-1.5
N.D.
carbon source
D-Mannose (C)
-0.3
-0.4
-1.2
-0.2
N.D.
carbon source
D-Mannitol (C)
-0.7
-0.1
-0.8
-0.5
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
+0.2
+0.1
-1.1
-1.1
N.D.
carbon source
D-Raffinose (C)
-0.4
-0.3
-0.7
-0.6
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
-0.9
-0.1
-0.8
-0.2
N.D.
stress
R2A with 3-octanone 5.3129 mM
-0.3
+0.1
+0.1
-1.8
N.D.
carbon source
D,L-Lactate (C)
-0.2
-0.2
-1.5
+0.0
N.D.
carbon source
Ying_all64 rep C; time point 2
-0.8
-0.1
-0.2
-0.8
N.D.
stress
R2A with 1-octen-3-ol 0.603032666666667 mM
-0.9
+0.1
-0.2
-0.9
N.D.
carbon source
Ying_all64 rep C; time point 1
-1.3
-0.3
-0.4
+0.2
N.D.
carbon source
NAG (C)
+0.2
-0.5
-0.7
-0.6
N.D.
carbon source
Ying_all64 rep A; time point 3
+0.0
-0.2
+0.4
-1.8
N.D.
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.5
+0.2
-0.6
-0.6
N.D.
carbon source
D,L-Lactate (C)
-1.4
-0.1
+0.4
-0.4
N.D.
carbon source
m-Inositol (C)
-0.5
-0.4
+0.2
-0.8
N.D.
carbon source
Xylitol (C)
+0.5
-0.3
-1.0
-0.6
N.D.
carbon source
D-Gluconic Acid (C)
-1.4
-0.0
-0.3
+0.4
N.D.
carbon source
Ying_all64 rep B; time point 3
+0.2
-0.0
+0.6
-1.6
N.D.
carbon source
Trisodium citrate (C)
+0.7
-0.3
-1.0
-0.3
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.5
+0.1
-0.9
+0.5
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.4
+0.2
+0.5
-0.9
N.D.
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.9
+0.3
+0.5
-0.4
N.D.
stress
R2A with 3-octanone 2.65516666666667 mM
-0.7
+0.1
+0.7
-0.5
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
-1.0
-0.0
+1.2
-0.3
N.D.
stress
R2A with 1-octen-3-ol 0.542729333333333 mM
-0.3
+0.1
+1.2
-1.0
N.D.
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