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Cofit
Protein
Homologs
Fitness for 5 genes in
Bosea sp. OAE506
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE41_RS00480 and ABIE41_RS00485 overlap by 61 nucleotides
ABIE41_RS00485 and ABIE41_RS00490 are separated by 28 nucleotides
ABIE41_RS00490 and ABIE41_RS00495 are separated by 151 nucleotides
ABIE41_RS00495 and ABIE41_RS00500 are separated by 60 nucleotides
ABIE41_RS00480: ABIE41_RS00480 - ATP-binding protein, at 85,252 to 85,830
_RS00480
ABIE41_RS00485: ABIE41_RS00485 - response regulator, at 85,770 to 86,198
_RS00485
ABIE41_RS00490: ABIE41_RS00490 - PAS domain-containing protein, at 86,227 to 87,321
_RS00490
ABIE41_RS00495: ABIE41_RS00495 - transposase, at 87,473 to 87,685
_RS00495
ABIE41_RS00500: ABIE41_RS00500 - response regulator, at 87,746 to 89,423
_RS00500
Group
Condition
ABIE41
_RS00480
ABIE41
_RS00485
ABIE41
_RS00490
ABIE41
_RS00495
ABIE41
_RS00500
carbon source
D-Galacturonic Acid (C)
-0.2
-0.5
-0.1
-0.0
-0.2
carbon source
D-Fructose (C)
-0.1
-0.6
-0.0
-0.2
+0.0
carbon source
D-Tagatose (C)
+0.0
-0.5
+0.2
-0.3
-0.1
carbon source
L-Proline (C)
+0.1
-0.4
+0.0
-0.3
+0.1
carbon source
a-Cyclodextrin (C)
-0.1
-0.3
-0.1
+0.2
-0.1
carbon source
D-Lactate (C)
-0.2
-0.4
+0.3
-0.1
-0.1
carbon source
L-Malic (C)
-0.3
-0.2
-0.1
-0.0
+0.3
carbon source
D-Glucose-6-Phosphate (C)
-0.1
-0.5
+0.1
+0.2
+0.2
carbon source
Fumarate (C)
+0.1
-0.3
+0.2
-0.2
+0.0
carbon source
D-Fructose (C)
-0.0
-0.5
+0.3
+0.1
+0.0
r2a no stress control
R2A no stress control
-0.1
+0.1
-0.5
+0.2
+0.1
carbon source
L-Arabinose (C)
+0.3
-0.1
+0.1
-0.4
-0.0
carbon source
D-Ribose (C)
+0.1
-0.3
+0.2
-0.2
+0.1
carbon source
L-Glutamic (C)
-0.0
-0.4
-0.0
+0.3
+0.3
carbon source
succinate (C)
+0.0
-0.6
+0.0
-0.0
+0.8
carbon source
L-Proline (C)
-0.1
-0.1
+0.3
+0.3
-0.1
carbon source
L-Malic (C)
-0.0
-0.2
-0.2
+0.2
+0.5
carbon source
pyruvate (C)
+0.1
+0.3
+0.2
-0.2
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.2
-0.3
+0.3
+0.1
+0.1
carbon source
L-Histidine (C)
+0.1
+0.1
+0.3
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2709965 mM
+0.2
+0.3
-0.2
+0.2
-0.0
carbon source
Tween 20 (C)
+0.2
+0.3
+0.3
-0.2
-0.1
dmso control
DMSO control
+0.1
+0.6
-0.1
-0.1
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.2
+0.1
-0.1
+0.4
-0.1
stress
R2A with 3-octanone 5.3129 mM
+0.5
+0.3
-0.2
+0.1
-0.1
dmso control
DMSO control
-0.1
+0.4
+0.1
+0.3
-0.1
carbon source
succinate (C)
+0.1
-0.2
+0.3
-0.1
+0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.1
+0.3
-0.1
+0.3
+0.1
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.1
+0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.2865 mM
+0.1
+0.4
-0.0
+0.3
+0.0
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ABIE41_RS00490
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