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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS29415 and ABIE40_RS29420 are separated by 389 nucleotides
ABIE40_RS29420 and ABIE40_RS29425 are separated by 65 nucleotides
ABIE40_RS29425 and ABIE40_RS29430 are separated by 101 nucleotides
ABIE40_RS29430 and ABIE40_RS29435 are separated by 67 nucleotides
ABIE40_RS29415: ABIE40_RS29415 - PAS domain-containing protein, at 579,365 to 582,532
_RS29415
ABIE40_RS29420: ABIE40_RS29420 - hypothetical protein, at 582,922 to 583,116
_RS29420
ABIE40_RS29425: ABIE40_RS29425 - LysR family transcriptional regulator, at 583,182 to 584,090
_RS29425
ABIE40_RS29430: ABIE40_RS29430 - SDR family NAD(P)-dependent oxidoreductase, at 584,192 to 585,115
_RS29430
ABIE40_RS29435: ABIE40_RS29435 - carboxymuconolactone decarboxylase family protein, at 585,183 to 585,623
_RS29435
Group
Condition
ABIE40
_RS29415
ABIE40
_RS29420
ABIE40
_RS29425
ABIE40
_RS29430
ABIE40
_RS29435
carbon source
D-Glucuronic Acid (C)
-0.2
-0.4
-0.5
+0.1
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.3
-0.5
-0.6
-0.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
-0.9
-0.2
+0.1
+0.1
carbon source
a-Cyclodextrin (C)
+0.0
-0.5
-0.4
+0.3
-0.5
carbon source
casaminos (C)
+0.1
+0.7
-0.9
-0.3
-0.3
carbon source
D-Lactate (C)
+0.2
-0.7
-0.0
+0.3
-0.3
carbon source
Fumarate (C)
+0.2
-0.2
+0.1
+0.4
-0.5
r2a no stress control
R2A no stress control
-0.3
+0.9
-0.4
+0.1
-0.0
dmso control
DMSO control
-0.2
+1.3
-0.5
-0.3
+0.1
r2a no stress control
R2A no stress control
-0.2
+1.2
-0.3
-0.2
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
+1.1
-0.0
+0.1
-0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.3
+0.8
-0.2
+0.2
-0.1
carbon source
D-Serine (C)
-0.2
+0.5
-0.3
+0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
+1.2
-0.4
-0.2
+0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
+1.0
+0.2
-0.3
+0.1
stress
R2A with 3-octanone 5.3129 mM
-0.1
+1.2
-0.0
-0.3
-0.0
stress
R2A with 3-octanone 10.6206 mM
-0.1
+1.7
+0.2
-0.3
-0.7
dmso control
DMSO control
-0.0
+1.1
-0.2
+0.1
-0.2
stress
R2A with 3-octanone 10.6206 mM
-0.1
+1.1
-0.3
-0.1
+0.1
stress
R2A with 3-octanone 5.3129 mM
-0.2
+0.6
-0.1
+0.2
+0.4
stress
R2A with 3-octanone 5.3129 mM
-0.2
+1.2
+0.1
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.0
+1.3
-0.3
+0.0
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
+0.9
+0.0
+0.4
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
+1.7
-0.3
-0.1
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.1
+1.0
-0.2
+0.4
+0.2
r2a no stress control
R2A no stress control
-0.2
+1.3
+0.0
+0.0
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
+1.4
-0.0
-0.0
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+1.4
+0.1
-0.0
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
+1.4
+0.2
+0.1
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
+1.7
+0.4
+0.7
-0.2
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