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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS28840 and ABIE40_RS28845 are separated by 3 nucleotides
ABIE40_RS28845 and ABIE40_RS28850 overlap by 4 nucleotides
ABIE40_RS28850 and ABIE40_RS28855 are separated by 8 nucleotides
ABIE40_RS28855 and ABIE40_RS28860 overlap by 4 nucleotides
ABIE40_RS28840: ABIE40_RS28840 - hypothetical protein, at 470,753 to 472,087
_RS28840
ABIE40_RS28845: ABIE40_RS28845 - hypothetical protein, at 472,091 to 473,125
_RS28845
ABIE40_RS28850: ABIE40_RS28850 - DUF4186 family protein, at 473,122 to 473,724
_RS28850
ABIE40_RS28855: ABIE40_RS28855 - helix-turn-helix transcriptional regulator, at 473,733 to 475,175
_RS28855
ABIE40_RS28860: ABIE40_RS28860 - hypothetical protein, at 475,172 to 475,699
_RS28860
Group
Condition
ABIE40
_RS28840
ABIE40
_RS28845
ABIE40
_RS28850
ABIE40
_RS28855
ABIE40
_RS28860
carbon source
Itaconic Acid (C)
-0.2
-0.1
-0.3
-0.5
-0.6
carbon source
L-Threonine (C)
-0.0
+0.1
-0.7
-0.5
-0.1
stress
R2A with 3-octanone 10.6206 mM
-0.3
-0.3
-0.7
+0.5
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.5
-0.3
-0.5
+0.4
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
-0.3
-0.5
+0.5
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-0.4
-0.6
+0.6
+0.0
stress
R2A with 3-octanone 10.6206 mM
-0.3
-0.3
-0.3
+0.6
-0.3
stress
R2A with 3-octanone 5.3129 mM
-0.1
-0.1
-1.1
+0.6
-0.0
stress
R2A with 3-octanone 5.3129 mM
-0.1
-0.1
-1.2
+0.5
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.3
-0.1
-0.6
+0.6
-0.2
stress
R2A with 3-octanone 15.9309 mM
-0.1
-0.3
-0.8
+0.4
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.6
-0.4
-0.6
+0.8
+0.3
stress
R2A with 3-octanone 5.3129 mM
-0.0
-0.2
-0.4
+0.6
-0.4
carbon source
D-Glucuronic Acid (C)
+0.2
-0.0
+0.3
-0.2
-0.7
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
-0.4
-0.3
+0.5
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.1
-0.6
+0.5
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
-0.1
-0.9
+0.6
+0.1
stress
R2A with 3-octanone 10.6206 mM
-0.2
-0.1
-0.4
+0.5
+0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.0
-0.1
-0.6
+0.6
+0.2
carbon source
casaminos (C)
-0.2
+0.0
+0.7
+0.1
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
-0.3
-0.6
+0.6
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
-0.2
-0.5
+0.7
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
-0.3
-0.3
+0.8
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
-0.4
-0.1
+0.7
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.3
-0.3
-0.0
+0.7
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
-0.4
-0.4
+0.6
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.0
-0.4
-0.2
+0.7
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
-0.2
+0.2
+0.7
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
+0.0
+0.2
+0.7
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.0
-0.0
-0.1
+0.9
+0.4
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ABIE40_RS28850
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