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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS28670 and ABIE40_RS28675 are separated by 126 nucleotides
ABIE40_RS28675 and ABIE40_RS28680 are separated by 23 nucleotides
ABIE40_RS28680 and ABIE40_RS28685 overlap by 83 nucleotides
ABIE40_RS28685 and ABIE40_RS28690 are separated by 126 nucleotides
ABIE40_RS28670: ABIE40_RS28670 - cyclodeaminase/cyclohydrolase family protein, at 432,182 to 432,778
_RS28670
ABIE40_RS28675: ABIE40_RS28675 - DUF4142 domain-containing protein, at 432,905 to 433,450
_RS28675
ABIE40_RS28680: ABIE40_RS28680 - alpha/beta hydrolase, at 433,474 to 434,652
_RS28680
ABIE40_RS28685: ABIE40_RS28685 - YbhB/YbcL family Raf kinase inhibitor-like protein, at 434,570 to 436,366
_RS28685
ABIE40_RS28690: ABIE40_RS28690 - thiamine pyrophosphate-requiring protein, at 436,493 to 438,280
_RS28690
Group
Condition
ABIE40
_RS28670
ABIE40
_RS28675
ABIE40
_RS28680
ABIE40
_RS28685
ABIE40
_RS28690
stress
R2A with 3-octanone 15.9309 mM
-2.2
-0.4
-0.5
-0.2
+0.1
carbon source
casaminos (C)
-1.5
-1.2
-0.2
+0.3
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.4
+0.2
-0.6
-0.3
+0.0
stress
R2A with 3-octanone 10.6206 mM
-2.3
+1.0
-0.2
-0.3
-0.4
stress
R2A with 3-octanone 5.3129 mM
-0.9
-0.8
-0.1
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.7
-0.6
-0.5
-0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.1
-0.5
+0.1
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.3
+0.3
-0.4
-0.2
+0.4
r2a no stress control
R2A no stress control
-1.1
+0.3
-0.2
-0.0
-0.0
stress
R2A with 3-octanone 5.3129 mM
-0.9
+0.7
-0.3
-0.4
+0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.6
+0.2
-0.3
-0.2
+0.2
carbon source
Thymidine (C)
+0.1
-0.1
-0.3
+0.3
-0.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.0
+0.7
+0.1
-0.3
-0.0
stress
R2A with 3-octanone 10.6206 mM
+0.7
-0.8
-0.1
-0.3
+0.1
carbon source
D-Sorbitol (C)
+0.5
-0.8
+0.3
+0.1
-0.3
carbon source
Adenine (C)
-0.6
-0.3
+0.3
+0.1
+0.3
carbon source
L-Asparagine (C)
-1.1
+0.7
+0.1
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
+0.9
-0.4
-0.1
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
+0.6
+0.1
-0.2
+0.2
dmso control
DMSO control
-0.6
+0.8
-0.0
-0.0
+0.1
stress
R2A with 3-octanone 15.9309 mM
-0.8
+1.3
-0.0
+0.1
-0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.7
+1.1
-0.2
-0.0
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.6
-0.1
+0.2
+0.6
carbon source
L-Threonine (C)
+0.2
-0.6
+0.3
+0.3
+0.2
carbon source
D-Fructose (C)
-0.3
+0.8
+0.2
-0.1
+0.1
carbon source
Adenosine (C)
-0.5
+0.7
+0.1
+0.3
+0.2
carbon source
D-Trehalose (C)
+0.3
+0.6
+0.2
+0.2
-0.3
carbon source
water (C)
+0.4
+0.6
+0.2
+0.2
+0.4
carbon source
L-Citrulline (C)
+0.1
+0.7
+0.3
+0.0
+0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.5
+0.6
+0.3
+0.2
+0.3
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