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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS28215 and ABIE40_RS28220 overlap by 21 nucleotides
ABIE40_RS28220 and ABIE40_RS28225 are separated by 384 nucleotides
ABIE40_RS28225 and ABIE40_RS28230 are separated by 116 nucleotides
ABIE40_RS28230 and ABIE40_RS28235 are separated by 53 nucleotides
ABIE40_RS28215: ABIE40_RS28215 - TetR/AcrR family transcriptional regulator, at 353,641 to 354,264
_RS28215
ABIE40_RS28220: ABIE40_RS28220 - AraC family transcriptional regulator, at 354,244 to 354,849
_RS28220
ABIE40_RS28225: ABIE40_RS28225 - SDR family oxidoreductase, at 355,234 to 355,968
_RS28225
ABIE40_RS28230: ABIE40_RS28230 - DUF1330 domain-containing protein, at 356,085 to 356,453
_RS28230
ABIE40_RS28235: ABIE40_RS28235 - WYL domain-containing protein, at 356,507 to 356,878
_RS28235
Group
Condition
ABIE40
_RS28215
ABIE40
_RS28220
ABIE40
_RS28225
ABIE40
_RS28230
ABIE40
_RS28235
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.2
-0.2
-0.1
-4.5
-0.1
stress
R2A with 3-octanone 15.9309 mM
-2.8
-0.4
-0.2
-1.0
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.3
-0.6
+0.2
-0.5
-1.4
carbon source
L-Lysine (C)
-0.2
+0.2
-0.8
-1.5
-1.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-2.7
-0.0
+0.5
-1.2
+0.2
carbon source
D-Lactate (C)
-1.0
+0.4
-0.6
-0.6
-1.4
carbon source
Thymidine (C)
-1.2
-0.1
-0.2
-1.6
-0.1
carbon source
succinate (C)
-0.6
-0.0
+0.1
-0.7
-1.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.7
+0.0
+0.0
-1.5
+0.5
carbon source
L-Arabinose (C)
-0.4
+0.3
-0.5
-0.5
-1.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.7
-0.1
+0.3
-1.4
+0.4
stress
R2A with 3-octanone 15.9309 mM
-1.5
-0.2
+0.3
-0.6
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-1.6
+0.1
+0.3
-1.6
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.1
-0.4
-0.0
-1.9
+1.0
stress
R2A with 1-octen-3-ol 0.904549 mM
-2.1
-0.7
-0.7
+1.0
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.7
+0.0
+0.1
-0.7
-0.2
stress
R2A with 3-octanone 5.3129 mM
-1.6
-0.2
+0.4
+0.0
-0.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.9
-0.0
+0.1
-1.5
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-2.4
-0.2
+0.0
+0.1
+0.3
stress
R2A with 3-octanone 10.6206 mM
-0.1
-0.2
-0.6
-1.5
+0.1
stress
R2A with 3-octanone 5.3129 mM
-1.1
-0.4
+0.0
-0.9
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-2.7
-0.2
-0.0
+0.4
+0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.4
-0.3
+0.1
+1.1
-1.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-2.3
+0.0
+0.3
+0.3
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.1
+0.3
-0.1
+0.7
-1.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.9
-0.3
+0.5
-0.9
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.7
-0.5
+0.0
-0.6
+1.0
stress
R2A with 3-octanone 5.3129 mM
-2.0
-0.4
+0.3
+0.4
+1.0
stress
R2A with 1-octen-3-ol 0.904549 mM
-1.8
-0.3
+0.5
+0.3
+0.9
stress
R2A with 3-octanone 10.6206 mM
-1.4
+0.0
+0.7
+1.1
-0.9
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