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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS27810 and ABIE40_RS27815 are separated by 193 nucleotides
ABIE40_RS27815 and ABIE40_RS27820 are separated by 69 nucleotides
ABIE40_RS27820 and ABIE40_RS27825 are separated by 420 nucleotides
ABIE40_RS27825 and ABIE40_RS27830 are separated by 556 nucleotides
ABIE40_RS27810: ABIE40_RS27810 - L,D-transpeptidase, at 273,661 to 274,635
_RS27810
ABIE40_RS27815: ABIE40_RS27815 - FAD/NAD(P)-binding protein, at 274,829 to 276,199
_RS27815
ABIE40_RS27820: ABIE40_RS27820 - LLM class flavin-dependent oxidoreductase, at 276,269 to 277,588
_RS27820
ABIE40_RS27825: ABIE40_RS27825 - ATP-binding protein, at 278,009 to 279,193
_RS27825
ABIE40_RS27830: ABIE40_RS27830 - DNA polymerase IV, at 279,750 to 280,835
_RS27830
Group
Condition
ABIE40
_RS27810
ABIE40
_RS27815
ABIE40
_RS27820
ABIE40
_RS27825
ABIE40
_RS27830
carbon source
casaminos (C)
-0.2
-0.3
-0.1
-0.4
-0.3
stress
R2A with 3-octanone 10.6206 mM
-0.3
-0.1
-0.6
-0.3
+0.2
carbon source
D-Lactate (C)
-0.5
+0.2
+0.1
-0.4
-0.4
stress
R2A with 3-octanone 5.3129 mM
+0.2
+0.1
-0.5
-0.5
-0.2
stress
R2A with 3-octanone 15.9309 mM
-0.2
+0.1
-0.2
-0.5
+0.3
carbon source
Fumarate (C)
-0.1
-0.0
-0.8
+0.1
+0.1
carbon source
D-Fructose (C)
-0.2
+0.1
-0.6
+0.1
+0.0
carbon source
D-Galactose (C)
-0.1
-0.1
-0.4
+0.3
-0.1
carbon source
Gelatin (C)
+0.1
+0.0
-0.5
+0.2
-0.1
carbon source
D-Fructose (C)
-0.2
-0.2
-0.3
+0.3
+0.1
carbon source
Trisodium citrate (C)
+0.0
-0.2
-0.4
+0.6
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
+0.3
-0.2
-0.4
-0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.0
+0.1
-0.5
+0.4
-0.1
stress
R2A with 3-octanone 5.3129 mM
+0.1
-0.2
-0.2
-0.2
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.2
-0.4
-0.2
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
-0.2
+0.2
-0.4
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
+0.1
-0.6
+0.3
+0.2
carbon source
L-Citrulline (C)
+0.0
+0.1
+0.2
+0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
+0.1
-0.3
-0.0
+0.5
carbon source
L-Glutamine (C)
+0.2
-0.1
-0.3
+0.4
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.1
+0.2
-0.4
+0.4
+0.2
carbon source
Ethanol (C)
+0.2
+0.1
-0.2
+0.4
+0.1
carbon source
Carnitine Hydrochloride (C)
+0.1
+0.2
-0.4
+0.6
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
+0.4
+0.1
-0.2
+0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.2
-0.5
+0.6
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.4
-0.0
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
+0.1
+0.0
+0.5
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
+0.1
-0.1
+0.3
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
+0.3
-0.1
-0.1
+0.8
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.3
-0.0
+0.9
+0.8
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ABIE40_RS27820
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