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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS27780 and ABIE40_RS27785 are separated by 67 nucleotides
ABIE40_RS27785 and ABIE40_RS27790 are separated by 47 nucleotides
ABIE40_RS27790 and ABIE40_RS27795 are separated by 53 nucleotides
ABIE40_RS27795 and ABIE40_RS27800 overlap by 4 nucleotides
ABIE40_RS27780: ABIE40_RS27780 - GntR family transcriptional regulator, at 266,869 to 267,618
_RS27780
ABIE40_RS27785: ABIE40_RS27785 - putative N-acetylmannosamine-6-phosphate 2-epimerase, at 267,686 to 269,209
_RS27785
ABIE40_RS27790: ABIE40_RS27790 - extracellular solute-binding protein, at 269,257 to 270,576
_RS27790
ABIE40_RS27795: ABIE40_RS27795 - sugar ABC transporter permease, at 270,630 to 271,502
_RS27795
ABIE40_RS27800: ABIE40_RS27800 - carbohydrate ABC transporter permease, at 271,499 to 272,320
_RS27800
Group
Condition
ABIE40
_RS27780
ABIE40
_RS27785
ABIE40
_RS27790
ABIE40
_RS27795
ABIE40
_RS27800
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-0.3
-0.2
+0.1
-0.3
carbon source
D-Fructose (C)
-0.2
-0.6
+0.0
-0.0
+0.3
carbon source
Glycolic Acid (C)
+0.2
-0.3
-0.0
-0.4
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.7
+0.2
+0.0
+0.3
-0.1
r2a no stress control
R2A no stress control
+0.2
+0.2
-0.2
+0.1
-0.4
carbon source
D-Sorbitol (C)
-0.0
-0.2
+0.1
-0.3
+0.3
stress
R2A with 3-octanone 5.3129 mM
-0.4
+0.4
-0.0
+0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.6
+0.3
+0.2
+0.3
-0.3
r2a no stress control
R2A no stress control
-0.4
+0.4
-0.1
+0.2
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
+0.2
+0.1
+0.4
-0.3
carbon source
D-Sorbitol (C)
-0.3
-0.2
+0.2
-0.0
+0.4
carbon source
Fumarate (C)
-0.3
+0.3
+0.2
+0.1
-0.2
carbon source
Ethanol (C)
+0.3
-0.1
-0.1
-0.1
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
+0.1
+0.0
+0.3
+0.4
carbon source
Gelatin (C)
+0.4
-0.0
+0.1
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.2
+0.1
-0.1
+0.5
+0.1
carbon source
L-Citrulline (C)
+0.3
+0.0
-0.2
-0.2
+0.6
carbon source
Thymidine (C)
-0.3
+0.2
+0.3
-0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.5
+0.5
+0.0
+0.3
+0.2
carbon source
L-Lysine (C)
+0.4
-0.2
+0.1
-0.0
+0.3
carbon source
D-Lactate (C)
+0.1
-0.4
+0.2
+0.5
+0.3
stress
R2A with 3-octanone 15.9309 mM
-0.2
+0.0
+0.3
+0.2
+0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
+0.5
+0.1
+0.3
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.3
+0.4
+0.1
+0.4
+0.1
carbon source
Glycolic Acid (C)
+0.5
-0.1
+0.2
-0.1
+0.4
carbon source
L-Glutamine (C)
-0.1
+0.3
+0.2
+0.4
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
+0.4
+0.1
+0.6
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.1
+0.1
+0.3
+0.5
+0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
+0.4
+0.0
+0.5
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.3
+0.4
+0.1
+0.4
+0.1
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ABIE40_RS27790
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