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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS27090 and ABIE40_RS27095 are separated by 13 nucleotides
ABIE40_RS27095 and ABIE40_RS27100 are separated by 616 nucleotides
ABIE40_RS27100 and ABIE40_RS27105 are separated by 79 nucleotides
ABIE40_RS27105 and ABIE40_RS27110 are separated by 328 nucleotides
ABIE40_RS27090: ABIE40_RS27090 - IS3 family transposase, at 136,909 to 138,098
_RS27090
ABIE40_RS27095: ABIE40_RS27095 - IS256 family transposase, at 138,112 to 139,308
_RS27095
ABIE40_RS27100: ABIE40_RS27100 - type II toxin-antitoxin system VapC family toxin, at 139,925 to 140,338
_RS27100
ABIE40_RS27105: ABIE40_RS27105 - ATP-binding protein, at 140,418 to 140,765
_RS27105
ABIE40_RS27110: ABIE40_RS27110 - helix-turn-helix transcriptional regulator, at 141,094 to 141,528
_RS27110
Group
Condition
ABIE40
_RS27090
ABIE40
_RS27095
ABIE40
_RS27100
ABIE40
_RS27105
ABIE40
_RS27110
carbon source
D-Fructose (C)
N.D.
-0.2
-4.3
+0.3
-0.6
carbon source
D-Galactose (C)
N.D.
+0.0
-4.0
-0.1
-0.4
r2a no stress control
R2A no stress control
N.D.
+0.1
-2.8
+0.2
-0.9
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.6
-2.5
-0.1
-0.3
stress
R2A with 3-octanone 15.9309 mM
N.D.
-0.2
-2.4
+0.3
-1.0
carbon source
a-Cyclodextrin (C)
N.D.
-0.0
-1.7
-0.0
-1.2
carbon source
L-Citrulline (C)
N.D.
-0.2
-0.4
+0.0
-2.4
carbon source
L-Lysine (C)
N.D.
+0.2
-2.1
-0.2
-0.9
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.1
-2.1
+0.0
-0.4
carbon source
L-Glutamine (C)
N.D.
-0.1
-1.0
+0.0
-1.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
+0.1
-2.4
-0.2
-0.2
carbon source
D-Sorbitol (C)
N.D.
-0.1
-1.0
-0.1
-1.5
stress
R2A with 3-octanone 5.3129 mM
N.D.
-0.4
-2.4
+0.1
+0.3
carbon source
D-Serine (C)
N.D.
+0.1
+0.3
-0.1
-2.7
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
-0.3
-2.4
-0.0
+0.4
carbon source
Glycolic Acid (C)
N.D.
-0.0
-0.3
+0.1
-2.0
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
N.D.
+0.1
-1.2
+0.1
-1.0
carbon source
Formate (C)
N.D.
-0.3
+0.6
-0.2
-2.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
+0.0
-2.2
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
+0.0
-2.2
+0.0
+0.4
stress
R2A with 3-octanone 15.9309 mM
N.D.
-0.2
-2.4
+0.2
+0.7
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
-0.1
+0.5
-0.3
-1.5
stress
R2A with 3-octanone 10.6206 mM
N.D.
-0.0
+0.6
+0.3
-2.0
carbon source
Adenine (C)
N.D.
+0.0
+0.7
+0.2
-1.7
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
+0.1
+1.2
-0.2
-1.6
carbon source
L-Alanine (C)
N.D.
+0.1
-1.5
+0.0
+1.0
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
-0.3
+1.1
+0.3
-0.9
dmso control
DMSO control
N.D.
+0.0
+1.8
+0.1
-1.4
stress
R2A with 3-octanone 10.6206 mM
N.D.
-0.4
+1.8
-0.0
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
-0.5
+2.5
-0.3
+0.1
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