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Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS25495 and ABIE40_RS25500 overlap by 11 nucleotides
ABIE40_RS25500 and ABIE40_RS25505 are separated by 196 nucleotides
ABIE40_RS25505 and ABIE40_RS25510 are separated by 40 nucleotides
ABIE40_RS25510 and ABIE40_RS25515 are separated by 83 nucleotides
ABIE40_RS25495: ABIE40_RS25495 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,274,756 to 1,275,070
_RS25495
ABIE40_RS25500: ABIE40_RS25500 - type II toxin-antitoxin system ParD family antitoxin, at 1,275,060 to 1,275,341
_RS25500
ABIE40_RS25505: ABIE40_RS25505 - LacI family DNA-binding transcriptional regulator, at 1,275,538 to 1,276,560
_RS25505
ABIE40_RS25510: ABIE40_RS25510 - sugar ABC transporter substrate-binding protein, at 1,276,601 to 1,277,839
_RS25510
ABIE40_RS25515: ABIE40_RS25515 - sugar ABC transporter permease, at 1,277,923 to 1,278,840
_RS25515
Group
Condition
ABIE40
_RS25495
ABIE40
_RS25500
ABIE40
_RS25505
ABIE40
_RS25510
ABIE40
_RS25515
carbon source
Thymidine (C)
+0.1
-4.8
+0.2
-0.1
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
-3.2
-0.1
+0.0
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
-3.1
+0.1
-0.1
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-3.2
+0.1
-0.1
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-3.2
+0.3
-0.2
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-3.1
-0.0
-0.0
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-3.1
-0.2
+0.0
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
-3.1
+0.1
-0.1
-0.2
stress
R2A with 3-octanone 5.3129 mM
-0.9
-2.7
+0.3
-0.2
-0.0
stress
R2A with 3-octanone 10.6206 mM
-0.2
-3.0
+0.1
+0.0
-0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
-3.1
+0.1
-0.1
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.3
-3.2
-0.1
-0.0
-0.3
stress
R2A with 3-octanone 15.9309 mM
-0.0
-3.0
-0.0
-0.3
+0.1
r2a no stress control
R2A no stress control
-0.0
-3.2
+0.1
+0.1
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.1
-3.1
+0.1
-0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
-3.2
+0.2
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
-3.2
+0.2
+0.0
-0.0
stress
R2A with 3-octanone 5.3129 mM
+0.3
-3.0
+0.1
-0.0
-0.5
stress
R2A with 3-octanone 5.3129 mM
-0.1
-2.9
+0.2
+0.1
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.3
-3.1
+0.1
-0.1
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-3.1
+0.5
-0.1
-0.3
stress
R2A with 3-octanone 10.6206 mM
+0.4
-3.1
+0.2
-0.0
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
-1.6
-0.1
-0.3
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.0
-3.2
+0.3
-0.0
+0.1
carbon source
Adenine (C)
+0.1
-2.6
-0.2
-0.1
+0.1
carbon source
D-Serine (C)
-0.3
-2.3
+0.0
+0.0
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.6
-1.3
+0.1
-0.1
-0.2
carbon source
L-Alanine (C)
-0.1
-1.9
+0.1
-0.1
-0.2
carbon source
Adenosine (C)
+0.4
-2.4
-0.1
-0.0
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
-1.6
+0.3
-0.0
-0.5
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