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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS24895 and ABIE40_RS24900 are separated by 17 nucleotides
ABIE40_RS24900 and ABIE40_RS24905 are separated by 419 nucleotides
ABIE40_RS24905 and ABIE40_RS24910 are separated by 241 nucleotides
ABIE40_RS24910 and ABIE40_RS24915 are separated by 224 nucleotides
ABIE40_RS24895: ABIE40_RS24895 - type I secretion system permease/ATPase, at 1,137,877 to 1,140,150
_RS24895
ABIE40_RS24900: ABIE40_RS24900 - Ig-like domain-containing protein, at 1,140,168 to 1,146,032
_RS24900
ABIE40_RS24905: ABIE40_RS24905 - TolC family outer membrane protein, at 1,146,452 to 1,147,870
_RS24905
ABIE40_RS24910: ABIE40_RS24910 - NmrA family NAD(P)-binding protein, at 1,148,112 to 1,148,978
_RS24910
ABIE40_RS24915: ABIE40_RS24915 - helix-turn-helix domain-containing protein, at 1,149,203 to 1,150,168
_RS24915
Group
Condition
ABIE40
_RS24895
ABIE40
_RS24900
ABIE40
_RS24905
ABIE40
_RS24910
ABIE40
_RS24915
carbon source
D-Glucose-6-Phosphate (C)
-0.8
-0.8
-0.6
+0.3
-0.1
carbon source
Glycolic Acid (C)
-0.5
-0.4
-0.2
-0.1
-0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.5
+0.0
-0.1
+0.3
-1.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.7
-0.1
-0.1
+0.2
-0.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.6
+0.2
+0.0
+0.2
-1.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.7
-0.0
-0.3
-0.3
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.3
+0.2
-0.0
-0.1
-0.9
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
+0.2
-0.1
-0.2
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
+0.0
+0.3
-0.4
-0.6
dmso control
DMSO control
-0.4
+0.1
-0.1
+0.1
-0.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
+0.2
+0.2
+0.4
-1.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.2
-0.3
-0.1
+0.3
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.6
+0.2
-0.1
+0.3
-0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.4
+0.0
+0.0
+0.3
-0.6
stress
R2A with 3-octanone 10.6206 mM
-0.6
-0.0
-0.5
+0.4
+0.2
carbon source
D-Lactate (C)
-0.4
-0.6
-0.2
+0.2
+0.4
carbon source
succinate (C)
+0.2
+0.2
+0.0
-0.5
-0.5
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
+0.2
-0.1
-0.5
+0.2
carbon source
D-Raffinose (C)
-0.1
+0.0
+0.2
+0.2
-0.8
stress
R2A with 3-octanone 5.3129 mM
-0.2
+0.2
-0.6
+0.6
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.5
+0.1
+0.1
-0.3
+0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.5
+0.2
+0.0
+0.5
-0.2
carbon source
a-Cyclodextrin (C)
-0.1
+0.0
+0.6
+0.3
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.6
+0.2
+0.2
-0.1
+0.5
carbon source
L-Lysine (C)
-0.1
-0.0
+0.7
+0.2
-0.4
carbon source
4-Hydroxybenzoic Acid (C)
+0.1
+0.1
+0.5
+0.3
-0.3
stress
R2A with 3-octanone 5.3129 mM
-0.4
-0.1
-0.0
+0.6
+0.6
carbon source
D-Glucuronic Acid (C)
+0.2
+0.3
+0.5
-0.1
-0.2
carbon source
Thymidine (C)
-0.0
+0.3
+0.5
+0.6
-0.0
carbon source
Fumarate (C)
+0.1
+0.3
+0.8
+0.2
+0.3
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