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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS24295 and ABIE40_RS24300 are separated by 258 nucleotides
ABIE40_RS24300 and ABIE40_RS24305 are separated by 97 nucleotides
ABIE40_RS24305 and ABIE40_RS24310 overlap by 4 nucleotides
ABIE40_RS24310 and ABIE40_RS24315 are separated by 160 nucleotides
ABIE40_RS24295: ABIE40_RS24295 - cytochrome c biogenesis protein DipZ, at 1,004,677 to 1,006,446
_RS24295
ABIE40_RS24300: ABIE40_RS24300 - alpha/beta hydrolase, at 1,006,705 to 1,007,748
_RS24300
ABIE40_RS24305: ABIE40_RS24305 - response regulator, at 1,007,846 to 1,008,586
_RS24305
ABIE40_RS24310: ABIE40_RS24310 - HAMP domain-containing sensor histidine kinase, at 1,008,583 to 1,009,905
_RS24310
ABIE40_RS24315: ABIE40_RS24315 - organic hydroperoxide resistance protein, at 1,010,066 to 1,010,482
_RS24315
Group
Condition
ABIE40
_RS24295
ABIE40
_RS24300
ABIE40
_RS24305
ABIE40
_RS24310
ABIE40
_RS24315
carbon source
Glycolic Acid (C)
+0.1
+0.0
-0.3
-3.6
-0.2
carbon source
D-Glucose-6-Phosphate (C)
+0.2
-0.3
-0.3
-3.3
+0.1
carbon source
Glycolic Acid (C)
-0.0
+0.0
-0.2
-3.2
-0.2
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.1
+0.1
+0.1
-3.5
-0.0
carbon source
pyruvate (C)
+0.0
+0.0
-0.2
-3.3
+0.0
carbon source
L-Tryptophan (C)
-0.0
+0.2
-0.2
-3.5
+0.1
carbon source
D-Sorbitol (C)
-0.1
+0.1
-0.3
-3.1
+0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-0.0
-0.0
+0.2
-3.6
+0.4
carbon source
pyruvate (C)
-0.0
+0.0
+0.2
-3.1
-0.1
carbon source
D-Glucose-6-Phosphate (C)
-0.0
-0.0
-0.2
-2.7
-0.0
carbon source
D-Sorbitol (C)
-0.1
+0.1
+0.0
-2.9
+0.2
carbon source
casaminos (C)
+0.2
-0.4
-0.2
-1.5
-0.8
carbon source
L-Alanine (C)
+0.2
-0.0
-0.7
-2.1
+0.0
carbon source
D-Fructose (C)
+0.2
-0.0
-0.7
-1.5
-0.5
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.1
-0.3
-2.0
+0.0
carbon source
D-Serine (C)
-0.0
-0.0
+0.2
-2.5
+0.1
carbon source
L-Threonine (C)
-0.1
+0.0
-1.1
-1.0
+0.0
carbon source
L-Tryptophan (C)
+0.2
-0.2
+0.1
-2.1
-0.0
carbon source
D-Raffinose (C)
-0.2
+0.2
-0.2
-1.6
-0.3
carbon source
Ethanol (C)
-0.1
+0.3
-0.7
-1.3
+0.1
carbon source
D-Fructose (C)
+0.2
-0.1
+0.0
-1.9
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
+0.3
-0.6
-1.6
+0.1
carbon source
D-Lactate (C)
-0.0
+0.1
-0.3
-1.7
+0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
+0.3
+0.3
-1.8
+0.0
carbon source
D-Glucuronic Acid (C)
+0.1
+0.1
+0.2
-1.9
+0.2
carbon source
L-Citrulline (C)
+0.4
+0.3
-0.1
-1.7
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.0
+0.2
-0.3
-1.3
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.6
+0.5
-1.6
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
+0.1
+0.6
-1.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
+0.1
+0.9
-0.9
+0.8
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