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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS24265 and ABIE40_RS24270 are separated by 75 nucleotides
ABIE40_RS24270 and ABIE40_RS24275 are separated by 82 nucleotides
ABIE40_RS24275 and ABIE40_RS24280 are separated by 3 nucleotides
ABIE40_RS24280 and ABIE40_RS24285 are separated by 102 nucleotides
ABIE40_RS24265: ABIE40_RS24265 - helix-turn-helix transcriptional regulator, at 998,783 to 999,607
_RS24265
ABIE40_RS24270: ABIE40_RS24270 - GyrI-like domain-containing protein, at 999,683 to 1,000,177
_RS24270
ABIE40_RS24275: ABIE40_RS24275 - RibD family protein, at 1,000,260 to 1,000,955
_RS24275
ABIE40_RS24280: ABIE40_RS24280 - cation:proton antiporter, at 1,000,959 to 1,002,500
_RS24280
ABIE40_RS24285: ABIE40_RS24285 - NAD(P)/FAD-dependent oxidoreductase, at 1,002,603 to 1,003,841
_RS24285
Group
Condition
ABIE40
_RS24265
ABIE40
_RS24270
ABIE40
_RS24275
ABIE40
_RS24280
ABIE40
_RS24285
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.5
-0.3
-0.2
-0.1
+0.3
carbon source
L-Lysine (C)
+0.2
-0.0
-0.4
-0.6
+0.0
carbon source
casaminos (C)
-1.0
+0.3
-0.2
+0.2
+0.2
carbon source
Thymidine (C)
-1.1
+0.2
+0.2
+0.4
-0.0
carbon source
L-Alanine (C)
-0.5
+0.2
+0.1
-0.3
+0.1
carbon source
L-Threonine (C)
-0.7
-0.0
-0.0
+0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
-0.0
+0.3
+0.0
+0.3
carbon source
pyruvate (C)
+0.3
+0.3
-0.2
+0.2
-0.2
carbon source
L-Citrulline (C)
-0.7
+0.3
+0.5
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.3
-0.3
+0.4
-0.1
+0.2
stress
R2A with 3-octanone 10.6206 mM
+0.5
-0.1
+0.3
-0.3
+0.2
carbon source
L-Citrulline (C)
-0.2
+0.2
+0.3
+0.1
+0.4
stress
R2A with 3-octanone 15.9309 mM
+0.5
-0.2
+0.2
+0.0
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.5
-0.4
+0.4
+0.1
+0.2
stress
R2A with 3-octanone 10.6206 mM
+0.5
-0.3
+0.1
+0.1
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.3
+0.3
+0.0
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
-0.2
+0.4
+0.2
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.4
-0.2
+0.2
+0.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.4
-0.0
+0.5
+0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
+0.1
+0.5
+0.1
+0.2
stress
R2A with 3-octanone 5.3129 mM
+0.6
-0.2
+0.3
+0.2
+0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.0
+0.1
+0.2
+0.4
r2a no stress control
R2A no stress control
+0.6
-0.1
+0.2
+0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
+0.1
+0.2
+0.2
+0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.4
-0.1
+0.5
+0.3
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.8
+0.0
+0.3
-0.0
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.5
-0.0
+0.3
+0.3
+0.2
stress
R2A with 3-octanone 5.3129 mM
+0.5
+0.2
+0.4
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
-0.0
+0.3
+0.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.6
+0.2
+0.4
+0.1
+0.3
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