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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS22730 and ABIE40_RS22735 are separated by 53 nucleotides
ABIE40_RS22735 and ABIE40_RS22740 are separated by 15 nucleotides
ABIE40_RS22740 and ABIE40_RS22745 are separated by 71 nucleotides
ABIE40_RS22745 and ABIE40_RS22750 overlap by 4 nucleotides
ABIE40_RS22730: ABIE40_RS22730 - RNA polymerase sigma factor, at 695,233 to 695,760
_RS22730
ABIE40_RS22735: ABIE40_RS22735 - YncE family protein, at 695,814 to 697,268
_RS22735
ABIE40_RS22740: ABIE40_RS22740 - DUF305 domain-containing protein, at 697,284 to 697,754
_RS22740
ABIE40_RS22745: ABIE40_RS22745 - CopD family protein, at 697,826 to 698,698
_RS22745
ABIE40_RS22750: ABIE40_RS22750 - copper homeostasis periplasmic binding protein CopC, at 698,695 to 699,060
_RS22750
Group
Condition
ABIE40
_RS22730
ABIE40
_RS22735
ABIE40
_RS22740
ABIE40
_RS22745
ABIE40
_RS22750
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.6
+0.0
+0.3
-0.5
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.0
-0.1
+0.4
-0.5
+0.3
stress
R2A with 3-octanone 15.9309 mM
-0.0
+0.0
+0.1
-0.5
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.1
+0.3
-0.7
-0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
-0.1
-0.5
-0.5
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.8
-0.0
+0.5
-0.3
+0.1
stress
R2A with 3-octanone 5.3129 mM
-0.4
-0.0
-0.3
-0.3
+0.5
stress
R2A with 3-octanone 10.6206 mM
-0.1
+0.2
+0.2
-0.5
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
+0.1
+0.3
-0.7
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.3
+0.1
+0.4
-0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
-0.1
+0.5
-0.1
-0.1
stress
R2A with 3-octanone 10.6206 mM
-0.2
-0.0
+0.2
-0.5
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
-0.1
+0.5
-0.4
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
+0.0
+0.4
-0.4
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
-0.2
+0.5
-0.4
+0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.0
-0.1
+0.3
-0.5
+0.3
carbon source
L-Arabinose (C)
-0.2
+0.1
+0.1
-0.3
+0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
+0.1
+0.3
-0.3
+0.5
carbon source
casaminos (C)
-0.5
+0.3
+0.2
-0.2
+0.6
stress
R2A with 3-octanone 10.6206 mM
-0.3
-0.2
+0.7
-0.1
+0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
+0.1
+0.5
-0.2
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
-0.1
+0.5
+0.2
+0.3
carbon source
4-Hydroxybenzoic Acid (C)
+0.3
+0.2
+0.1
-0.2
+0.4
carbon source
Formate (C)
-0.1
+0.1
+0.4
+0.2
+0.4
carbon source
Carnitine Hydrochloride (C)
+0.1
+0.1
+0.8
+0.2
-0.0
carbon source
4-Hydroxybenzoic Acid (C)
+0.3
+0.1
+0.3
+0.2
+0.4
carbon source
Thymidine (C)
+0.1
+0.3
+0.2
+0.4
+0.1
carbon source
L-Aspartic Acid (C)
+0.2
+0.2
+0.7
+0.2
+0.0
carbon source
Fumarate (C)
+0.5
+0.2
+0.5
+0.2
+0.0
carbon source
L-Citrulline (C)
+0.4
+0.2
+0.4
+0.2
+0.4
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