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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS22015 and ABIE40_RS22020 are separated by 58 nucleotides
ABIE40_RS22020 and ABIE40_RS22025 are separated by 295 nucleotides
ABIE40_RS22025 and ABIE40_RS22030 overlap by 104 nucleotides
ABIE40_RS22030 and ABIE40_RS22035 are separated by 52 nucleotides
ABIE40_RS22015: ABIE40_RS22015 - DUF1579 domain-containing protein, at 527,094 to 527,564
_RS22015
ABIE40_RS22020: ABIE40_RS22020 - VOC family protein, at 527,623 to 528,408
_RS22020
ABIE40_RS22025: ABIE40_RS22025 - VCBS domain-containing protein, at 528,704 to 536,962
_RS22025
ABIE40_RS22030: ABIE40_RS22030 - cadherin-like domain-containing protein, at 536,859 to 542,042
_RS22030
ABIE40_RS22035: ABIE40_RS22035 - GGDEF domain-containing protein, at 542,095 to 542,850
_RS22035
Group
Condition
ABIE40
_RS22015
ABIE40
_RS22020
ABIE40
_RS22025
ABIE40
_RS22030
ABIE40
_RS22035
carbon source
casaminos (C)
-0.5
-0.2
-0.0
-0.2
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.1
+0.1
-0.2
-0.2
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.3
-0.1
-0.2
-0.2
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
+0.2
-0.3
-0.5
+0.0
stress
R2A with 3-octanone 10.6206 mM
-0.4
+0.0
-0.3
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
+0.2
-0.2
-0.3
-0.0
carbon source
D-Glucose-6-Phosphate (C)
-0.2
-0.2
-0.0
-0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
+0.2
-0.3
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
+0.3
-0.4
-0.2
+0.0
stress
R2A with 3-octanone 15.9309 mM
+0.0
+0.2
-0.2
-0.2
-0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.2
-0.2
-0.2
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
+0.2
-0.3
-0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
+0.1
-0.3
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.2
-0.3
-0.1
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
+0.2
-0.2
-0.1
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.2
-0.2
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
+0.2
-0.2
-0.2
+0.0
stress
R2A with 3-octanone 10.6206 mM
-0.1
+0.3
-0.2
-0.2
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.3
-0.2
-0.2
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.2
+0.2
-0.1
-0.2
+0.2
carbon source
L-Alanine (C)
-0.0
-0.2
-0.1
-0.0
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.0
+0.2
-0.2
-0.1
+0.1
r2a no stress control
R2A no stress control
-0.0
+0.2
-0.1
-0.2
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
+0.2
-0.2
-0.2
+0.3
stress
R2A with 3-octanone 10.6206 mM
+0.2
+0.1
-0.2
-0.2
+0.1
carbon source
L-Threonine (C)
+0.1
-0.1
-0.0
-0.2
+0.3
carbon source
Trisodium citrate (C)
-0.2
+0.1
-0.1
-0.0
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.3
-0.1
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.0
+0.3
-0.1
-0.2
+0.3
carbon source
Formate (C)
+0.0
+0.2
-0.1
+0.1
+0.3
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