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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS21555 and ABIE40_RS21560 are separated by 145 nucleotides
ABIE40_RS21560 and ABIE40_RS21565 are separated by 61 nucleotides
ABIE40_RS21565 and ABIE40_RS21570 overlap by 4 nucleotides
ABIE40_RS21570 and ABIE40_RS21575 are separated by 14 nucleotides
ABIE40_RS21555: ABIE40_RS21555 - carboxymuconolactone decarboxylase family protein, at 431,160 to 431,549
_RS21555
ABIE40_RS21560: ABIE40_RS21560 - transporter substrate-binding domain-containing protein, at 431,695 to 432,528
_RS21560
ABIE40_RS21565: ABIE40_RS21565 - amino acid ABC transporter permease, at 432,590 to 433,564
_RS21565
ABIE40_RS21570: ABIE40_RS21570 - amino acid ABC transporter ATP-binding protein, at 433,561 to 434,304
_RS21570
ABIE40_RS21575: ABIE40_RS21575 - lactonase family protein, at 434,319 to 435,407
_RS21575
Group
Condition
ABIE40
_RS21555
ABIE40
_RS21560
ABIE40
_RS21565
ABIE40
_RS21570
ABIE40
_RS21575
carbon source
D-Raffinose (C)
-0.3
-0.3
+0.1
-0.5
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.1
-0.2
-0.2
-0.1
-0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.4
-0.3
-0.3
-0.2
-0.7
stress
R2A with 3-octanone 5.3129 mM
+0.3
+0.3
-0.1
-0.9
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.3
+0.1
-0.2
-0.4
-0.1
r2a no stress control
R2A no stress control
+0.2
-0.1
-0.2
-0.3
-0.2
stress
R2A with 3-octanone 10.6206 mM
-0.0
-0.0
-0.2
+0.4
-0.8
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
-0.2
-0.2
+0.0
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
-0.2
-0.4
-0.4
+0.1
dmso control
DMSO control
+0.2
-0.1
-0.2
-0.1
-0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.2
-0.3
-0.7
+0.5
-0.0
carbon source
Itaconic Acid (C)
-0.5
+0.1
-0.2
-0.1
+0.3
carbon source
water (C)
-0.2
+0.2
+0.1
-0.5
+0.2
stress
R2A with 3-octanone 10.6206 mM
-0.1
+0.3
-0.2
+0.2
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.3
-0.2
+0.2
-0.1
carbon source
L-Citrulline (C)
+0.0
+0.5
-0.1
-0.7
+0.3
carbon source
D-Serine (C)
+0.2
+0.2
+0.1
-0.5
-0.0
carbon source
Adenosine (C)
+0.3
-0.1
-0.0
-0.4
+0.2
carbon source
a-Cyclodextrin (C)
+0.1
+0.0
-0.1
-0.4
+0.4
carbon source
D-Fructose (C)
+0.5
-0.0
+0.1
-0.1
-0.4
carbon source
Thymidine (C)
-0.2
+0.1
-0.2
+0.0
+0.5
stress
R2A with 3-octanone 5.3129 mM
+0.4
+0.2
+0.1
-0.1
-0.4
carbon source
casaminos (C)
+0.3
+0.2
-0.0
-0.4
+0.1
carbon source
L-Methionine (C)
-0.3
+0.2
+0.1
+0.1
+0.3
carbon source
4-Hydroxybenzoic Acid (C)
-0.0
+0.2
+0.2
-0.2
+0.4
carbon source
casaminos (C)
+0.6
-0.1
-0.0
-0.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.6
+0.1
-0.1
+0.3
-0.2
carbon source
a-Cyclodextrin (C)
-0.1
+0.2
+0.2
-0.2
+0.6
carbon source
Fumarate (C)
-0.0
+0.3
+0.3
-0.6
+0.8
r2a no stress control
R2A no stress control
+0.7
-0.1
-0.0
+0.7
+0.1
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ABIE40_RS21565
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