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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20785 and ABIE40_RS20790 overlap by 4 nucleotides
ABIE40_RS20790 and ABIE40_RS20795 are separated by 11 nucleotides
ABIE40_RS20795 and ABIE40_RS20800 are separated by 77 nucleotides
ABIE40_RS20800 and ABIE40_RS20805 are separated by 258 nucleotides
ABIE40_RS20785: ABIE40_RS20785 - type II toxin-antitoxin system HicA family toxin, at 267,029 to 267,283
_RS20785
ABIE40_RS20790: ABIE40_RS20790 - type II toxin-antitoxin system HicB family antitoxin, at 267,280 to 267,639
_RS20790
ABIE40_RS20795: ABIE40_RS20795 - isovaleryl-CoA dehydrogenase, at 267,651 to 268,814
_RS20795
ABIE40_RS20800: ABIE40_RS20800 - indolepyruvate ferredoxin oxidoreductase family protein, at 268,892 to 272,362
_RS20800
ABIE40_RS20805: ABIE40_RS20805 - Xaa-Pro aminopeptidase, at 272,621 to 273,985
_RS20805
Group
Condition
ABIE40
_RS20785
ABIE40
_RS20790
ABIE40
_RS20795
ABIE40
_RS20800
ABIE40
_RS20805
carbon source
pyruvate (C)
-5.5
-4.6
-3.9
-4.5
+0.0
carbon source
pyruvate (C)
-3.0
-5.1
-3.8
-3.7
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.8
-1.6
+0.1
+0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
-1.3
+0.1
-0.1
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
-1.9
-0.1
-0.1
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-1.3
+0.1
-0.1
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-0.9
-0.0
-0.1
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.0
-1.3
+0.2
-0.1
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.8
-0.1
+0.0
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
-1.1
+0.2
-0.1
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
-0.5
-0.2
-0.1
-0.5
carbon source
Fumarate (C)
-0.2
-1.0
+0.1
-0.2
-0.1
carbon source
Trisodium citrate (C)
-0.3
-0.9
-0.1
-0.1
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
-1.1
-0.1
-0.3
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.0
-1.1
+0.2
-0.0
-0.2
dmso control
DMSO control
-0.0
-0.9
+0.1
-0.0
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.1
-1.1
+0.1
+0.1
-0.2
carbon source
L-Tryptophan (C)
+0.1
-1.1
+0.1
-0.1
-0.1
carbon source
L-Citrulline (C)
-0.0
-0.8
-0.4
+0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.2
-0.4
+0.0
+0.1
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-1.0
+0.1
+0.0
-0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
-0.3
+0.2
-0.0
-0.4
carbon source
L-Arabinose (C)
-0.3
-0.8
+0.1
+0.1
+0.1
stress
R2A with 3-octanone 15.9309 mM
+0.6
-0.9
+0.1
-0.2
-0.3
carbon source
D-Serine (C)
+0.3
-1.0
-0.1
+0.0
+0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.2
-0.9
+0.0
+0.1
+0.2
carbon source
Thymidine (C)
-0.9
-0.1
+0.3
+0.2
+0.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.5
-0.9
+0.1
+0.1
+0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.4
+0.2
+0.3
-0.1
-0.5
stress
R2A with 3-octanone 10.6206 mM
+0.4
-0.4
+0.3
+0.1
+0.1
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