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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20710 and ABIE40_RS20715 are separated by 158 nucleotides
ABIE40_RS20715 and ABIE40_RS20720 overlap by 2 nucleotides
ABIE40_RS20720 and ABIE40_RS20725 are separated by 142 nucleotides
ABIE40_RS20725 and ABIE40_RS20730 overlap by 1 nucleotides
ABIE40_RS20710: ABIE40_RS20710 - ABC transporter ATP-binding protein, at 252,028 to 253,849
_RS20710
ABIE40_RS20715: ABIE40_RS20715 - hypothetical protein, at 254,008 to 254,139
_RS20715
ABIE40_RS20720: ABIE40_RS20720 - DegQ family serine endoprotease, at 254,138 to 255,631
_RS20720
ABIE40_RS20725: ABIE40_RS20725 - amino acid ABC transporter permease, at 255,774 to 256,445
_RS20725
ABIE40_RS20730: ABIE40_RS20730 - amino acid ABC transporter permease, at 256,445 to 257,116
_RS20730
Group
Condition
ABIE40
_RS20710
ABIE40
_RS20715
ABIE40
_RS20720
ABIE40
_RS20725
ABIE40
_RS20730
carbon source
casaminos (C)
-0.2
-0.6
-0.2
-0.2
-0.1
carbon source
D-Trehalose (C)
+0.1
-0.7
-0.2
-0.0
-0.0
carbon source
Adenine (C)
-0.1
-0.6
+0.0
+0.2
-0.1
carbon source
Glycolic Acid (C)
+0.2
-0.5
+0.0
-0.2
-0.1
carbon source
L-Alanine (C)
-0.1
-0.5
+0.2
-0.2
+0.1
carbon source
D-Lactate (C)
+0.1
-0.5
-0.1
-0.1
+0.3
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.0
+0.3
+0.4
-0.4
-0.5
carbon source
D-Raffinose (C)
+0.2
-0.9
+0.0
+0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
+0.1
+0.4
-0.3
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
-0.3
+0.3
+0.1
-0.4
stress
R2A with 3-octanone 5.3129 mM
-0.4
-0.1
+0.5
-0.1
+0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
+0.3
+0.3
-0.2
-0.2
stress
R2A with 3-octanone 10.6206 mM
-0.1
+0.3
+0.2
-0.3
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
+0.3
+0.3
-0.2
-0.3
dmso control
DMSO control
+0.1
+0.3
+0.3
-0.1
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
+0.5
+0.4
-0.0
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
+0.1
+0.5
-0.2
+0.0
r2a no stress control
R2A no stress control
+0.1
+0.6
+0.2
-0.1
-0.1
r2a no stress control
R2A no stress control
+0.5
+0.1
+0.4
-0.0
-0.3
dmso control
DMSO control
+0.3
+0.6
+0.0
-0.1
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
+0.7
+0.3
-0.1
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
+0.1
+0.6
-0.3
+0.1
stress
R2A with 3-octanone 5.3129 mM
+0.3
+0.3
+0.3
-0.3
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.4
+0.3
-0.1
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.3
+0.3
-0.1
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.0
+0.6
-0.2
+0.1
carbon source
D-Fructose (C)
-0.1
+0.4
+0.3
+0.1
+0.3
r2a no stress control
R2A no stress control
+0.2
+1.0
+0.1
-0.0
-0.1
stress
R2A with 3-octanone 10.6206 mM
+0.4
+0.7
+0.5
-0.1
-0.2
stress
R2A with 3-octanone 5.3129 mM
+0.2
+0.8
+0.4
-0.0
+0.4
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ABIE40_RS20720
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