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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20695 and ABIE40_RS20700 are separated by 21 nucleotides
ABIE40_RS20700 and ABIE40_RS20705 are separated by 2 nucleotides
ABIE40_RS20705 and ABIE40_RS20710 are separated by 27 nucleotides
ABIE40_RS20710 and ABIE40_RS20715 are separated by 158 nucleotides
ABIE40_RS20695: ABIE40_RS20695 - ABC transporter permease, at 248,561 to 249,436
_RS20695
ABIE40_RS20700: ABIE40_RS20700 - gamma-glutamyltransferase family protein, at 249,458 to 251,242
_RS20700
ABIE40_RS20705: ABIE40_RS20705 - DUF1028 domain-containing protein, at 251,245 to 252,000
_RS20705
ABIE40_RS20710: ABIE40_RS20710 - ABC transporter ATP-binding protein, at 252,028 to 253,849
_RS20710
ABIE40_RS20715: ABIE40_RS20715 - hypothetical protein, at 254,008 to 254,139
_RS20715
Group
Condition
ABIE40
_RS20695
ABIE40
_RS20700
ABIE40
_RS20705
ABIE40
_RS20710
ABIE40
_RS20715
carbon source
casaminos (C)
-0.7
+0.3
+0.0
-0.2
-0.6
carbon source
Thymidine (C)
-1.0
-0.0
+0.7
-0.0
-0.4
carbon source
D-Glucose-6-Phosphate (C)
-0.6
+0.1
+0.4
-0.0
-0.6
carbon source
D-Trehalose (C)
-0.2
-0.1
+0.3
+0.1
-0.7
carbon source
D-Raffinose (C)
+0.0
-0.1
+0.2
+0.2
-0.9
carbon source
Adenine (C)
+0.1
-0.3
+0.4
-0.1
-0.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.7
+0.1
+0.3
+0.1
-0.3
stress
R2A with 3-octanone 15.9309 mM
-0.7
+0.0
+0.5
+0.1
-0.1
stress
R2A with 3-octanone 5.3129 mM
-0.3
+0.2
+0.4
-0.4
-0.1
carbon source
a-Cyclodextrin (C)
-0.2
-0.4
+0.4
-0.0
+0.2
carbon source
L-Alanine (C)
-0.2
-0.2
+0.4
+0.3
-0.2
stress
R2A with 3-octanone 5.3129 mM
-0.7
+0.3
+0.3
+0.1
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.5
+0.3
+0.3
-0.1
+0.1
carbon source
L-Asparagine (C)
-0.3
+0.0
+0.6
+0.1
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.6
+0.2
+0.2
+0.4
+0.0
stress
R2A with 3-octanone 10.6206 mM
-0.6
+0.2
+0.3
-0.1
+0.5
carbon source
Glycolic Acid (C)
+0.6
+0.1
+0.0
+0.2
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.6
+0.4
+0.3
+0.2
+0.1
carbon source
D-Lactate (C)
+0.5
+0.0
+0.4
+0.1
-0.5
carbon source
D-Serine (C)
+0.3
-0.2
+0.3
-0.2
+0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-0.1
+0.3
+0.2
+0.7
stress
R2A with 3-octanone 5.3129 mM
-0.3
+0.3
+0.5
+0.3
+0.3
r2a no stress control
R2A no stress control
-0.6
+0.1
+0.3
+0.2
+1.0
dmso control
DMSO control
-0.2
+0.2
+0.3
+0.3
+0.6
carbon source
Formate (C)
+0.3
+0.1
+0.4
+0.0
+0.5
carbon source
L-Citrulline (C)
+0.9
-0.0
+0.3
+0.2
-0.0
stress
R2A with 3-octanone 5.3129 mM
+0.2
+0.3
-0.0
+0.2
+0.8
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.4
+0.1
+0.2
+0.4
+0.3
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.0
+0.4
+0.6
+0.2
+0.5
stress
R2A with 3-octanone 10.6206 mM
-0.5
+0.4
+1.0
+0.4
+0.7
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