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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20645 and ABIE40_RS20650 are separated by 196 nucleotides
ABIE40_RS20650 and ABIE40_RS20655 are separated by 237 nucleotides
ABIE40_RS20655 and ABIE40_RS20660 are separated by 181 nucleotides
ABIE40_RS20660 and ABIE40_RS20665 are separated by 77 nucleotides
ABIE40_RS20645: ABIE40_RS20645 - GntR family transcriptional regulator, at 235,550 to 236,320
_RS20645
ABIE40_RS20650: ABIE40_RS20650 - DUF5054 domain-containing protein, at 236,517 to 238,430
_RS20650
ABIE40_RS20655: ABIE40_RS20655 - substrate-binding domain-containing protein, at 238,668 to 239,681
_RS20655
ABIE40_RS20660: ABIE40_RS20660 - ABC transporter substrate-binding protein, at 239,863 to 240,891
_RS20660
ABIE40_RS20665: ABIE40_RS20665 - iron ABC transporter permease, at 240,969 to 243,209
_RS20665
Group
Condition
ABIE40
_RS20645
ABIE40
_RS20650
ABIE40
_RS20655
ABIE40
_RS20660
ABIE40
_RS20665
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.0
+0.3
-4.3
+0.1
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.7
-0.0
-2.1
+0.0
+0.3
stress
R2A with 3-octanone 10.6206 mM
-0.4
-0.0
-2.0
-0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.9
+0.1
-0.8
-0.4
+0.0
carbon source
L-Threonine (C)
-0.4
+0.1
-1.2
-0.1
-0.0
carbon source
a-Cyclodextrin (C)
-0.4
+0.1
-1.2
-0.1
+0.1
carbon source
L-Tryptophan (C)
-0.2
+0.1
-1.3
+0.0
-0.1
stress
R2A with 3-octanone 5.3129 mM
-0.4
+0.1
-1.1
-0.0
+0.2
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.4
-0.1
-0.9
-0.0
+0.2
stress
R2A with 3-octanone 10.6206 mM
-0.8
+0.2
-0.8
-0.2
+0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
+0.1
-1.1
-0.2
+0.4
stress
R2A with 3-octanone 15.9309 mM
+0.1
+0.1
-1.1
-0.3
+0.1
carbon source
Thymidine (C)
-0.4
-0.1
-1.0
+0.2
+0.2
carbon source
D-Sorbitol (C)
+0.3
-0.2
-0.9
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
-0.0
-1.3
+0.0
+0.2
carbon source
D-Glucuronic Acid (C)
+0.7
-0.1
-1.1
-0.2
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.5
+0.2
-0.6
-0.1
+0.3
carbon source
D-Sorbitol (C)
+0.8
-0.1
-1.0
+0.0
-0.1
stress
R2A with 3-octanone 15.9309 mM
+0.7
+0.1
-1.1
-0.1
+0.2
carbon source
L-Alanine (C)
-0.9
+0.0
+0.9
-0.0
-0.0
carbon source
D-Glucose-6-Phosphate (C)
+0.8
+0.1
-0.9
+0.0
-0.0
r2a no stress control
R2A no stress control
+0.6
+0.2
-0.6
-0.2
+0.4
carbon source
L-Citrulline (C)
+1.1
-0.1
-0.2
-0.1
-0.1
carbon source
Trisodium citrate (C)
+0.8
+0.1
+0.5
-0.2
+0.0
carbon source
L-Alanine (C)
+0.1
-0.0
+1.9
-0.1
-0.2
carbon source
Carnitine Hydrochloride (C)
+0.8
+0.0
+0.7
+0.1
+0.0
carbon source
D-Trehalose (C)
+0.7
+0.2
+1.4
-0.1
-0.2
carbon source
Carnitine Hydrochloride (C)
+0.8
+0.0
+2.0
-0.2
-0.1
carbon source
D-Glucose (C)
+0.2
+0.1
+7.1
+0.0
-0.2
carbon source
D-Glucose (C)
+0.2
+0.1
+8.4
+0.1
-0.1
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