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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20630 and ABIE40_RS20635 are separated by 40 nucleotides
ABIE40_RS20635 and ABIE40_RS20640 are separated by 4 nucleotides
ABIE40_RS20640 and ABIE40_RS20645 overlap by 4 nucleotides
ABIE40_RS20645 and ABIE40_RS20650 are separated by 196 nucleotides
ABIE40_RS20630: ABIE40_RS20630 - amino acid ABC transporter permease, at 233,233 to 233,916
_RS20630
ABIE40_RS20635: ABIE40_RS20635 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD, at 233,957 to 234,712
_RS20635
ABIE40_RS20640: ABIE40_RS20640 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 234,717 to 235,553
_RS20640
ABIE40_RS20645: ABIE40_RS20645 - GntR family transcriptional regulator, at 235,550 to 236,320
_RS20645
ABIE40_RS20650: ABIE40_RS20650 - DUF5054 domain-containing protein, at 236,517 to 238,430
_RS20650
Group
Condition
ABIE40
_RS20630
ABIE40
_RS20635
ABIE40
_RS20640
ABIE40
_RS20645
ABIE40
_RS20650
carbon source
D-Glucose-6-Phosphate (C)
-1.6
-1.2
-1.2
+0.5
+0.1
carbon source
L-Alanine (C)
-0.4
-1.8
-0.2
-0.9
+0.0
carbon source
D-Glucose-6-Phosphate (C)
-1.7
-0.9
-1.5
+0.8
+0.1
carbon source
Gelatin (C)
-0.4
-2.1
-0.0
+0.0
-0.1
stress
R2A with 3-octanone 10.6206 mM
-0.6
-1.2
-0.3
-0.4
-0.0
carbon source
D-Glucuronic Acid (C)
-0.2
-2.7
-0.0
+0.7
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.4
-0.9
-0.1
-0.9
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.1
-1.4
+0.0
-0.8
+0.0
carbon source
Adenosine (C)
-0.2
-1.4
+0.1
-0.5
+0.1
carbon source
casaminos (C)
-0.2
-1.9
-0.3
+0.6
-0.2
carbon source
D-Sorbitol (C)
-0.2
-1.9
+0.1
+0.3
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.6
-0.2
-0.1
-0.9
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.3
-0.8
-0.1
-0.5
+0.2
carbon source
Carnitine Hydrochloride (C)
+0.0
-2.4
+0.1
+0.8
+0.0
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
-1.4
-0.1
+0.3
+0.1
carbon source
L-Leucine (C)
+0.0
-1.8
+0.1
+0.4
+0.1
carbon source
L-Asparagine (C)
-0.2
-1.3
+0.0
+0.4
+0.1
carbon source
L-Arabinose (C)
-0.1
-1.4
-0.1
+0.5
+0.1
carbon source
L-Glutamine (C)
-0.2
-1.2
+0.2
+0.6
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.0
-1.0
-0.4
+0.6
+0.0
carbon source
L-Methionine (C)
-0.2
-1.3
+0.2
+0.4
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.6
+0.6
-0.1
-0.6
+0.1
carbon source
L-Aspartic Acid (C)
-0.2
-1.3
+0.2
+0.8
+0.0
carbon source
Carnitine Hydrochloride (C)
+0.0
-1.3
+0.1
+0.8
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.5
-0.2
-0.4
+0.5
+0.2
carbon source
D-Fructose (C)
-0.1
-1.0
-0.0
+0.8
+0.1
carbon source
D-Sorbitol (C)
-0.3
-0.5
+0.2
+0.8
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.4
+0.9
-0.1
-0.3
+0.1
carbon source
Trisodium citrate (C)
+0.1
-0.7
+0.1
+0.8
+0.1
carbon source
L-Citrulline (C)
-0.2
+0.2
+0.6
+1.1
-0.1
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