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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20515 and ABIE40_RS20520 overlap by 4 nucleotides
ABIE40_RS20520 and ABIE40_RS20525 overlap by 8 nucleotides
ABIE40_RS20525 and ABIE40_RS20530 are separated by 38 nucleotides
ABIE40_RS20530 and ABIE40_RS20535 are separated by 87 nucleotides
ABIE40_RS20515: ABIE40_RS20515 - siderophore-interacting protein, at 206,312 to 207,355
_RS20515
ABIE40_RS20520: ABIE40_RS20520 - Fe(3+)-hydroxamate ABC transporter permease FhuB, at 207,352 to 209,325
_RS20520
ABIE40_RS20525: ABIE40_RS20525 - ABC transporter substrate-binding protein, at 209,318 to 210,157
_RS20525
ABIE40_RS20530: ABIE40_RS20530 - ATP-binding cassette domain-containing protein, at 210,196 to 210,975
_RS20530
ABIE40_RS20535: ABIE40_RS20535 - TonB-dependent siderophore receptor, at 211,063 to 213,228
_RS20535
Group
Condition
ABIE40
_RS20515
ABIE40
_RS20520
ABIE40
_RS20525
ABIE40
_RS20530
ABIE40
_RS20535
stress
R2A with 3-octanone 10.6206 mM
-0.5
+0.2
-1.5
-0.3
-0.1
carbon source
Formate (C)
-0.3
-0.0
-0.9
-0.1
-0.0
carbon source
L-Tryptophan (C)
-0.3
-0.0
-0.7
-0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.0
+0.4
-0.3
-0.3
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.2
-0.6
-0.1
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
+0.6
-0.8
-0.1
-0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
+0.4
-0.2
-0.4
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
+0.5
-0.2
-0.3
-0.2
stress
R2A with 3-octanone 10.6206 mM
-0.1
+0.2
-0.3
+0.2
-0.2
stress
R2A with 3-octanone 15.9309 mM
+0.2
+0.3
-0.1
-0.4
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.4
-0.1
-0.0
-0.5
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.3
+0.6
+0.0
-0.1
-0.3
stress
R2A with 3-octanone 15.9309 mM
-0.0
+0.3
-0.3
+0.3
-0.3
carbon source
L-Arabinose (C)
-0.0
+0.3
-0.5
+0.3
+0.1
stress
R2A with 3-octanone 10.6206 mM
+0.2
+0.6
-0.2
-0.2
-0.3
stress
R2A with 3-octanone 5.3129 mM
+0.1
+0.5
-0.1
-0.3
-0.1
carbon source
Itaconic Acid (C)
-0.5
+0.2
+0.3
+0.1
+0.1
stress
R2A with 3-octanone 5.3129 mM
+0.3
+0.3
+0.2
-0.4
-0.1
carbon source
Fumarate (C)
-0.6
+0.4
+0.2
+0.1
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.6
+0.1
-0.0
-0.4
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
+0.2
+0.6
-0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.1
+0.5
-0.1
+0.2
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.0
+0.4
+0.2
+0.3
-0.3
carbon source
pyruvate (C)
-0.2
+0.3
+0.4
+0.2
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
+0.5
+0.3
-0.1
-0.2
r2a no stress control
R2A no stress control
+0.2
+0.3
+0.5
-0.1
-0.1
carbon source
L-Lysine (C)
+0.1
+0.2
+0.2
+0.6
-0.1
stress
R2A with 3-octanone 5.3129 mM
+0.3
+0.5
-0.0
+0.5
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
+0.3
+0.4
+0.2
-0.1
carbon source
L-Citrulline (C)
+0.2
+0.3
+0.1
+0.9
+0.1
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