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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS20410 and ABIE40_RS20415 are separated by 26 nucleotides
ABIE40_RS20415 and ABIE40_RS20420 are separated by 135 nucleotides
ABIE40_RS20420 and ABIE40_RS20425 are separated by 154 nucleotides
ABIE40_RS20425 and ABIE40_RS20430 are separated by 1 nucleotides
ABIE40_RS20410: ABIE40_RS20410 - MocE family 2Fe-2S type ferredoxin, at 186,883 to 187,197
_RS20410
ABIE40_RS20415: ABIE40_RS20415 - fatty acid desaturase family protein, at 187,224 to 188,309
_RS20415
ABIE40_RS20420: ABIE40_RS20420 - LacI family DNA-binding transcriptional regulator, at 188,445 to 189,473
_RS20420
ABIE40_RS20425: ABIE40_RS20425 - TIM barrel protein, at 189,628 to 190,440
_RS20425
ABIE40_RS20430: ABIE40_RS20430 - precorrin-4 C(11)-methyltransferase, at 190,442 to 191,200
_RS20430
Group
Condition
ABIE40
_RS20410
ABIE40
_RS20415
ABIE40
_RS20420
ABIE40
_RS20425
ABIE40
_RS20430
carbon source
casaminos (C)
-0.9
-0.2
-0.2
+0.1
-3.7
carbon source
L-Citrulline (C)
-0.4
-0.0
+0.1
-0.4
-4.2
carbon source
D-Sorbitol (C)
-0.4
+0.1
-0.1
-0.1
-4.1
carbon source
Formate (C)
-0.5
-0.0
+0.3
-0.3
-4.0
carbon source
Carnitine Hydrochloride (C)
-0.4
+0.1
+0.0
-0.3
-4.1
carbon source
D-Fructose (C)
-0.1
+0.1
-0.0
-0.3
-4.3
carbon source
a-Cyclodextrin (C)
-0.5
+0.1
-0.0
-0.1
-4.0
carbon source
L-Lysine (C)
-0.2
+0.1
+0.3
-0.4
-4.3
carbon source
L-Leucine (C)
-0.2
+0.0
-0.3
+0.3
-4.2
carbon source
D-Trehalose (C)
-0.1
+0.3
+0.0
-0.3
-4.2
carbon source
D-Glucose-6-Phosphate (C)
-0.4
+0.1
+0.0
+0.2
-4.2
carbon source
Glycolic Acid (C)
+0.2
+0.2
-0.1
-0.2
-4.2
carbon source
L-Tryptophan (C)
+0.1
+0.1
+0.2
-0.3
-4.0
carbon source
Ethanol (C)
-0.2
+0.1
+0.3
-0.0
-4.1
carbon source
L-Aspartic Acid (C)
-0.1
+0.2
+0.1
+0.2
-4.2
carbon source
L-Methionine (C)
-0.6
+0.0
+0.3
+0.5
-4.0
carbon source
Ethanol (C)
-0.4
+0.2
+0.0
+0.4
-4.0
carbon source
D-Glucose (C)
-0.1
+0.1
-0.1
+0.4
-4.1
carbon source
D-Ribose (C)
+0.1
+0.2
+0.0
+0.3
-4.3
carbon source
Trisodium citrate (C)
-0.2
+0.3
+0.2
+0.1
-4.1
carbon source
L-Threonine (C)
+0.1
+0.1
-0.1
+0.4
-4.2
carbon source
D-Serine (C)
-0.2
+0.1
+0.2
+0.5
-4.1
carbon source
Itaconic Acid (C)
+0.2
+0.1
+0.3
-0.2
-4.0
carbon source
Itaconic Acid (C)
+0.0
+0.2
+0.2
+0.4
-4.1
carbon source
L-Glutamine (C)
+0.1
+0.3
+0.1
+0.2
-4.0
carbon source
D-Glucuronic Acid (C)
-0.3
+0.2
+0.1
+0.4
-3.7
carbon source
Formate (C)
+0.4
+0.3
+0.0
+0.2
-4.1
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
+0.2
+0.2
+0.3
+0.3
-4.0
stress
R2A with 3-octanone 5.3129 mM
+0.4
-0.1
-0.4
+0.6
-3.2
carbon source
Thymidine (C)
+0.2
+0.2
+0.7
-0.1
-3.7
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