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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS19210 and ABIE40_RS19215 are separated by 22 nucleotides
ABIE40_RS19215 and ABIE40_RS19220 are separated by 74 nucleotides
ABIE40_RS19220 and ABIE40_RS19225 are separated by 81 nucleotides
ABIE40_RS19225 and ABIE40_RS19230 are separated by 197 nucleotides
ABIE40_RS19210: ABIE40_RS19210 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 3,856,869 to 3,857,486
_RS19210
ABIE40_RS19215: ABIE40_RS19215 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 3,857,509 to 3,859,369
_RS19215
ABIE40_RS19220: ABIE40_RS19220 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 3,859,444 to 3,860,748
_RS19220
ABIE40_RS19225: ABIE40_RS19225 - transcription termination factor Rho, at 3,860,830 to 3,862,095
_RS19225
ABIE40_RS19230: ABIE40_RS19230 - protoporphyrinogen oxidase HemJ, at 3,862,293 to 3,862,829
_RS19230
Group
Condition
ABIE40
_RS19210
ABIE40
_RS19215
ABIE40
_RS19220
ABIE40
_RS19225
ABIE40
_RS19230
stress
R2A with 1-octen-3-ol 0.904549 mM
-1.3
-0.8
-0.6
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.7
-0.8
-0.1
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.6
-1.4
-0.4
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
-1.3
-1.0
+0.1
N.D.
N.D.
stress
R2A with 3-octanone 10.6206 mM
-1.5
-0.4
-0.3
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
-1.3
-0.9
+0.1
N.D.
N.D.
carbon source
Adenine (C)
-0.7
-0.6
-0.7
N.D.
N.D.
stress
R2A with 3-octanone 10.6206 mM
-0.7
-0.7
-0.4
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
-0.6
-0.7
-0.4
N.D.
N.D.
carbon source
L-Tryptophan (C)
-0.4
-1.2
-0.2
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
-1.1
-0.4
-0.2
N.D.
N.D.
stress
R2A with 3-octanone 15.9309 mM
-1.5
-0.6
+0.3
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.3
-0.8
+0.3
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.5
-0.3
+0.0
N.D.
N.D.
carbon source
L-Leucine (C)
-1.0
-0.8
+0.2
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
-1.5
-0.6
+0.5
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
-1.3
-0.5
+0.2
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.7
-0.4
+0.5
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.3
-0.6
+0.3
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.0
-0.8
+0.3
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.6
-0.4
+0.6
N.D.
N.D.
stress
R2A with 3-octanone 10.6206 mM
-0.8
-0.8
+0.2
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.8
-0.8
+0.6
N.D.
N.D.
r2a no stress control
R2A no stress control
-1.7
+0.0
+0.8
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-1.2
-0.2
+0.6
N.D.
N.D.
dmso control
DMSO control
-1.2
+0.1
+0.7
N.D.
N.D.
carbon source
D-Glucuronic Acid (C)
-0.2
+0.6
+1.0
N.D.
N.D.
carbon source
L-Lysine (C)
-0.2
+0.5
+1.1
N.D.
N.D.
carbon source
L-Arabinose (C)
-0.1
+1.4
+1.7
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.4
+1.6
+1.4
N.D.
N.D.
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