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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS19175 and ABIE40_RS19180 are separated by 81 nucleotides
ABIE40_RS19180 and ABIE40_RS19185 are separated by 200 nucleotides
ABIE40_RS19185 and ABIE40_RS19190 overlap by 11 nucleotides
ABIE40_RS19190 and ABIE40_RS19195 are separated by 10 nucleotides
ABIE40_RS19175: ABIE40_RS19175 - propionyl-CoA synthetase, at 3,848,107 to 3,850,017
_RS19175
ABIE40_RS19180: ABIE40_RS19180 - YggS family pyridoxal phosphate-dependent enzyme, at 3,850,099 to 3,850,758
_RS19180
ABIE40_RS19185: ABIE40_RS19185 - leucine--tRNA ligase, at 3,850,959 to 3,853,589
_RS19185
ABIE40_RS19190: ABIE40_RS19190 - LPS assembly lipoprotein LptE, at 3,853,579 to 3,854,100
_RS19190
ABIE40_RS19195: ABIE40_RS19195 - DNA polymerase III subunit delta, at 3,854,111 to 3,855,148
_RS19195
Group
Condition
ABIE40
_RS19175
ABIE40
_RS19180
ABIE40
_RS19185
ABIE40
_RS19190
ABIE40
_RS19195
carbon source
Ethanol (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
L-Alanine (C)
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
-0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 10.6206 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 10.6206 mM
+0.1
N.D.
N.D.
N.D.
N.D.
dmso control
DMSO control
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 10.6206 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
N.D.
N.D.
N.D.
N.D.
dmso control
DMSO control
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
N.D.
N.D.
N.D.
N.D.
r2a no stress control
R2A no stress control
+0.2
N.D.
N.D.
N.D.
N.D.
r2a no stress control
R2A no stress control
+0.2
N.D.
N.D.
N.D.
N.D.
dmso control
DMSO control
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.3
N.D.
N.D.
N.D.
N.D.
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