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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS19050 and ABIE40_RS19055 are separated by 113 nucleotides
ABIE40_RS19055 and ABIE40_RS19060 are separated by 81 nucleotides
ABIE40_RS19060 and ABIE40_RS19065 are separated by 54 nucleotides
ABIE40_RS19065 and ABIE40_RS19070 are separated by 181 nucleotides
ABIE40_RS19050: ABIE40_RS19050 - 3-isopropylmalate dehydrogenase, at 3,815,903 to 3,817,015
_RS19050
ABIE40_RS19055: ABIE40_RS19055 - phosphatase PAP2 family protein, at 3,817,129 to 3,817,887
_RS19055
ABIE40_RS19060: ABIE40_RS19060 - lipid A 1-phosphatase LpxE, at 3,817,969 to 3,818,697
_RS19060
ABIE40_RS19065: ABIE40_RS19065 - MFS transporter, at 3,818,752 to 3,820,635
_RS19065
ABIE40_RS19070: ABIE40_RS19070 - ABC transporter permease, at 3,820,817 to 3,822,076
_RS19070
Group
Condition
ABIE40
_RS19050
ABIE40
_RS19055
ABIE40
_RS19060
ABIE40
_RS19065
ABIE40
_RS19070
carbon source
D-Sorbitol (C)
-5.8
-0.2
-0.1
-2.4
-0.1
carbon source
D-Sorbitol (C)
-6.1
-0.0
-0.0
-2.2
-0.1
carbon source
L-Aspartic Acid (C)
-7.2
-0.2
-0.2
+0.0
-0.4
carbon source
Thymidine (C)
-6.5
-0.2
-0.2
+0.0
-0.6
carbon source
a-Cyclodextrin (C)
-6.6
-0.1
-0.6
+0.0
-0.1
carbon source
D-Galactose (C)
-6.6
-0.2
-0.2
+0.0
-0.4
carbon source
water (C)
-7.0
-0.0
-0.4
-0.1
+0.2
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-6.2
-0.1
-0.5
-0.2
-0.2
carbon source
5-Keto-D-Gluconic Acid potassium salt (C)
-6.6
+0.0
-0.0
-0.2
-0.2
carbon source
L-Citrulline (C)
-6.6
-0.4
+0.3
-0.0
-0.2
carbon source
Trisodium citrate (C)
-6.7
-0.1
+0.2
-0.1
-0.2
carbon source
Gelatin (C)
-6.7
-0.1
+0.2
-0.2
-0.2
carbon source
D-Serine (C)
-6.5
-0.1
-0.2
-0.3
+0.1
carbon source
Adenosine (C)
-6.6
-0.4
+0.0
-0.0
+0.1
carbon source
D-Serine (C)
-6.2
-0.1
-0.1
-0.3
-0.1
carbon source
D-Glucose-6-Phosphate (C)
-6.7
-0.2
-0.1
-0.0
+0.2
carbon source
casaminos (C)
-6.4
+0.1
-0.2
-0.1
-0.0
carbon source
Itaconic Acid (C)
-6.8
+0.1
+0.1
+0.0
-0.0
carbon source
L-Citrulline (C)
-6.7
-0.0
+0.2
-0.0
+0.1
carbon source
Formate (C)
-6.5
-0.3
+0.2
-0.0
+0.1
carbon source
D-Trehalose (C)
-6.9
-0.0
+0.0
+0.3
+0.1
carbon source
Carnitine Hydrochloride (C)
-6.8
+0.0
+0.2
+0.1
+0.0
carbon source
L-Methionine (C)
-6.7
-0.1
-0.0
-0.0
+0.4
carbon source
Formate (C)
-6.5
-0.2
+0.1
+0.0
+0.2
carbon source
Adenine (C)
-6.6
+0.0
-0.0
-0.1
+0.4
carbon source
Glycolic Acid (C)
-5.8
-0.2
+0.1
-0.9
+0.5
carbon source
L-Leucine (C)
-6.3
-0.1
+0.3
+0.1
-0.2
carbon source
D-Galactose (C)
-6.5
-0.0
+0.2
-0.0
+0.2
carbon source
L-Asparagine (C)
-6.3
+0.0
+0.5
-0.0
-0.1
carbon source
L-Threonine (C)
-6.0
-0.2
+0.3
-0.1
+0.2
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