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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS18615 and ABIE40_RS18620 are separated by 115 nucleotides
ABIE40_RS18620 and ABIE40_RS18625 are separated by 221 nucleotides
ABIE40_RS18625 and ABIE40_RS18630 overlap by 1 nucleotides
ABIE40_RS18630 and ABIE40_RS18635 overlap by 14 nucleotides
ABIE40_RS18615: ABIE40_RS18615 - MarR family transcriptional regulator, at 3,723,793 to 3,724,320
_RS18615
ABIE40_RS18620: ABIE40_RS18620 - MDR family MFS transporter, at 3,724,436 to 3,725,971
_RS18620
ABIE40_RS18625: ABIE40_RS18625 - thiamine ABC transporter substrate binding subunit, at 3,726,193 to 3,727,215
_RS18625
ABIE40_RS18630: ABIE40_RS18630 - thiamine/thiamine pyrophosphate ABC transporter permease ThiP, at 3,727,215 to 3,728,852
_RS18630
ABIE40_RS18635: ABIE40_RS18635 - ATP-binding cassette domain-containing protein, at 3,728,839 to 3,729,549
_RS18635
Group
Condition
ABIE40
_RS18615
ABIE40
_RS18620
ABIE40
_RS18625
ABIE40
_RS18630
ABIE40
_RS18635
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-2.4
+0.1
-0.2
-0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-2.3
+0.2
-0.2
-0.4
-0.1
stress
R2A with 1-octen-3-ol 1.3568235 mM
-2.4
+0.0
-0.1
-0.1
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
-1.5
-0.1
-0.1
-0.3
-0.4
carbon source
4-Hydroxybenzoic Acid (C)
-1.5
-0.1
-0.2
-0.2
-0.4
carbon source
L-Tryptophan (C)
-2.4
+0.2
-0.0
+0.1
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
-2.2
+0.1
-0.0
+0.0
+0.1
carbon source
Ethanol (C)
-1.4
-0.1
+0.1
-0.0
-0.3
carbon source
Ethanol (C)
-1.2
+0.0
+0.0
-0.1
-0.5
carbon source
Adenosine (C)
-1.6
-0.1
-0.0
-0.0
-0.0
stress
R2A with 3-octanone 10.6206 mM
-1.5
-0.1
-0.1
+0.1
-0.1
carbon source
D-Serine (C)
-0.8
-0.2
-0.2
-0.2
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-1.3
+0.3
-0.3
-0.1
-0.2
carbon source
Gelatin (C)
-1.2
-0.2
-0.1
+0.0
-0.2
carbon source
D-Sorbitol (C)
-1.4
+0.1
-0.0
-0.1
-0.1
carbon source
Gelatin (C)
-1.2
+0.0
-0.2
-0.1
-0.1
carbon source
D-Raffinose (C)
-1.1
-0.2
-0.0
-0.1
-0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.4
+0.1
-0.1
-0.2
+0.0
carbon source
Glycolic Acid (C)
-1.2
-0.0
-0.0
+0.1
-0.2
carbon source
D-Lactate (C)
-1.3
-0.1
-0.2
+0.1
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-1.5
+0.1
+0.1
-0.1
+0.0
carbon source
Itaconic Acid (C)
-0.9
-0.0
+0.0
-0.0
-0.4
dmso control
DMSO control
-1.3
+0.1
-0.1
-0.0
-0.0
r2a no stress control
R2A no stress control
-1.5
+0.1
-0.2
-0.0
+0.4
stress
R2A with 3-octanone 5.3129 mM
-1.1
+0.3
-0.1
-0.2
+0.1
carbon source
L-Tryptophan (C)
-1.2
+0.3
+0.2
+0.1
+0.2
carbon source
L-Lysine (C)
-1.9
+0.2
+0.6
+0.7
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.7
+0.2
-0.2
-0.2
-0.2
carbon source
L-Lysine (C)
-0.6
+0.1
+0.2
+0.3
+0.4
carbon source
casaminos (C)
-0.6
+0.3
+0.4
+0.3
+0.1
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