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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS17465 and ABIE40_RS17470 overlap by 2 nucleotides
ABIE40_RS17470 and ABIE40_RS17475 overlap by 36 nucleotides
ABIE40_RS17475 and ABIE40_RS17480 are separated by 76 nucleotides
ABIE40_RS17480 and ABIE40_RS17485 are separated by 18 nucleotides
ABIE40_RS17465: ABIE40_RS17465 - DNA-3-methyladenine glycosylase 2 family protein, at 3,491,766 to 3,492,452
_RS17465
ABIE40_RS17470: ABIE40_RS17470 - tRNA glutamyl-Q(34) synthetase GluQRS, at 3,492,451 to 3,493,332
_RS17470
ABIE40_RS17475: ABIE40_RS17475 - YihY/virulence factor BrkB family protein, at 3,493,297 to 3,494,262
_RS17475
ABIE40_RS17480: ABIE40_RS17480 - SDR family oxidoreductase, at 3,494,339 to 3,495,172
_RS17480
ABIE40_RS17485: ABIE40_RS17485 - twin transmembrane helix small protein, at 3,495,191 to 3,495,394
_RS17485
Group
Condition
ABIE40
_RS17465
ABIE40
_RS17470
ABIE40
_RS17475
ABIE40
_RS17480
ABIE40
_RS17485
stress
R2A with 3-octanone 15.9309 mM
-0.1
-0.3
-0.9
-0.3
N.D.
stress
R2A with 3-octanone 10.6206 mM
-0.1
-0.2
-0.9
-0.3
N.D.
stress
R2A with 3-octanone 10.6206 mM
-0.1
-0.3
-0.9
-0.2
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.1
-0.2
-0.4
-0.7
N.D.
stress
R2A with 3-octanone 10.6206 mM
-0.1
-0.0
-0.6
-0.4
N.D.
stress
R2A with 3-octanone 5.3129 mM
-0.2
-0.1
-0.6
-0.1
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-0.1
-0.5
-0.3
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
-0.2
+0.0
-0.4
-0.3
N.D.
stress
R2A with 3-octanone 15.9309 mM
+0.1
-0.0
-0.8
-0.1
N.D.
stress
R2A with 3-octanone 5.3129 mM
+0.0
-0.1
-0.5
-0.2
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-0.2
-0.3
-0.2
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-0.2
-0.5
-0.1
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.3
-0.1
-0.5
-0.2
N.D.
carbon source
D-Lactate (C)
-0.3
-0.3
+0.1
+0.3
N.D.
carbon source
Fumarate (C)
-0.0
-0.1
+0.4
-0.4
N.D.
carbon source
casaminos (C)
+0.4
+0.1
+0.3
-0.2
N.D.
carbon source
L-Lysine (C)
+0.2
+0.2
+0.3
-0.2
N.D.
carbon source
Thymidine (C)
+0.1
-0.2
+0.5
+0.3
N.D.
carbon source
L-Arabinose (C)
-0.0
+0.1
+0.2
+0.4
N.D.
carbon source
L-Tryptophan (C)
+0.1
+0.0
+0.2
+0.4
N.D.
carbon source
pyruvate (C)
+0.1
+0.1
+0.3
+0.2
N.D.
carbon source
water (C)
+0.1
+0.1
+0.2
+0.3
N.D.
carbon source
Gelatin (C)
+0.2
+0.0
+0.2
+0.4
N.D.
carbon source
Ethanol (C)
+0.2
+0.1
+0.3
+0.3
N.D.
carbon source
D-Galactose (C)
+0.2
+0.0
+0.3
+0.4
N.D.
carbon source
Itaconic Acid (C)
+0.3
+0.2
+0.4
+0.1
N.D.
carbon source
Itaconic Acid (C)
+0.2
+0.1
+0.3
+0.3
N.D.
carbon source
D-Glucose (C)
+0.2
+0.2
+0.3
+0.2
N.D.
carbon source
L-Tryptophan (C)
+0.2
+0.3
+0.3
+0.5
N.D.
carbon source
pyruvate (C)
+0.5
+0.3
+0.4
+0.4
N.D.
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