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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS16890 and ABIE40_RS16895 are separated by 119 nucleotides
ABIE40_RS16895 and ABIE40_RS16900 are separated by 197 nucleotides
ABIE40_RS16900 and ABIE40_RS16905 overlap by 4 nucleotides
ABIE40_RS16905 and ABIE40_RS16910 overlap by 11 nucleotides
ABIE40_RS16890: ABIE40_RS16890 - LysR family transcriptional regulator, at 3,370,253 to 3,371,164
_RS16890
ABIE40_RS16895: ABIE40_RS16895 - ABC transporter substrate-binding protein, at 3,371,284 to 3,372,444
_RS16895
ABIE40_RS16900: ABIE40_RS16900 - ABC transporter ATP-binding protein, at 3,372,642 to 3,373,625
_RS16900
ABIE40_RS16905: ABIE40_RS16905 - ABC transporter permease, at 3,373,622 to 3,374,584
_RS16905
ABIE40_RS16910: ABIE40_RS16910 - ABC transporter permease, at 3,374,574 to 3,375,389
_RS16910
Group
Condition
ABIE40
_RS16890
ABIE40
_RS16895
ABIE40
_RS16900
ABIE40
_RS16905
ABIE40
_RS16910
carbon source
D-Lactate (C)
-1.2
-0.2
+0.1
-0.1
-0.6
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.8
-0.0
+0.2
-0.1
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.2
-0.3
-0.1
-0.3
-0.0
carbon source
L-Arabinose (C)
-0.3
-0.2
-0.3
+0.1
-0.3
carbon source
Thymidine (C)
-0.1
-0.1
-0.3
+0.1
-0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.3
+0.1
-0.4
-0.3
stress
R2A with 3-octanone 10.6206 mM
-0.3
-0.1
+0.3
-0.3
+0.0
dmso control
DMSO control
-0.1
-0.1
+0.3
-0.1
-0.3
carbon source
L-Tryptophan (C)
+0.3
-0.1
-0.4
-0.0
+0.1
stress
R2A with 3-octanone 15.9309 mM
+0.4
-0.2
-0.1
-0.3
-0.0
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
-0.2
+0.1
-0.4
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.0
-0.1
+0.4
-0.3
-0.1
carbon source
Fumarate (C)
-0.2
-0.1
-0.1
+0.0
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.2
-0.3
+0.1
-0.2
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
-0.2
+0.2
-0.4
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.2
-0.0
+0.2
-0.2
+0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.1
-0.2
+0.3
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
-0.2
+0.2
-0.3
+0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
-0.1
+0.2
-0.3
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-0.3
+0.6
-0.2
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.5
-0.2
+0.1
-0.3
+0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.3
-0.2
+0.5
-0.2
-0.0
carbon source
L-Asparagine (C)
+0.5
-0.0
+0.3
+0.1
-0.3
carbon source
Adenosine (C)
+0.6
-0.1
+0.1
+0.0
-0.2
carbon source
L-Threonine (C)
+0.3
-0.2
+0.0
+0.2
+0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
+0.0
+0.3
-0.2
+0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
+0.4
-0.1
+0.6
-0.2
+0.2
carbon source
D-Glucuronic Acid (C)
+0.6
-0.1
+0.4
-0.0
+0.1
carbon source
D-Raffinose (C)
+0.6
-0.1
+0.1
+0.1
+0.3
carbon source
L-Threonine (C)
+0.5
-0.0
+0.1
+0.1
+0.6
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