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Protein
Homologs
Fitness for 5 genes in
Rhizobium sp. OAE497
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE40_RS15605 and ABIE40_RS15610 are separated by 8 nucleotides
ABIE40_RS15610 and ABIE40_RS15615 are separated by 21 nucleotides
ABIE40_RS15615 and ABIE40_RS15620 are separated by 401 nucleotides
ABIE40_RS15620 and ABIE40_RS15625 are separated by 119 nucleotides
ABIE40_RS15605: ABIE40_RS15605 - hypothetical protein, at 3,097,499 to 3,098,635
_RS15605
ABIE40_RS15610: ABIE40_RS15610 - protein TolR, at 3,098,644 to 3,099,099
_RS15610
ABIE40_RS15615: ABIE40_RS15615 - protein TolQ, at 3,099,121 to 3,099,840
_RS15615
ABIE40_RS15620: ABIE40_RS15620 - tol-pal system-associated acyl-CoA thioesterase, at 3,100,242 to 3,100,691
_RS15620
ABIE40_RS15625: ABIE40_RS15625 - NAD-dependent epimerase/dehydratase family protein, at 3,100,811 to 3,102,031
_RS15625
Group
Condition
ABIE40
_RS15605
ABIE40
_RS15610
ABIE40
_RS15615
ABIE40
_RS15620
ABIE40
_RS15625
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
-4.7
-0.4
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
-2.5
+0.1
carbon source
Carnitine Hydrochloride (C)
N.D.
N.D.
N.D.
-1.7
+0.1
carbon source
casaminos (C)
N.D.
N.D.
N.D.
-1.4
-0.2
carbon source
Itaconic Acid (C)
N.D.
N.D.
N.D.
-1.9
+0.3
carbon source
L-Lysine (C)
N.D.
N.D.
N.D.
-1.4
+0.1
carbon source
Carnitine Hydrochloride (C)
N.D.
N.D.
N.D.
-1.3
-0.0
carbon source
L-Asparagine (C)
N.D.
N.D.
N.D.
-1.2
+0.4
carbon source
succinate (C)
N.D.
N.D.
N.D.
-0.9
+0.2
carbon source
D-Trehalose (C)
N.D.
N.D.
N.D.
-0.9
+0.3
carbon source
L-Methionine (C)
N.D.
N.D.
N.D.
-0.7
+0.2
stress
R2A with 3-octanone 10.6206 mM
N.D.
N.D.
N.D.
+0.6
-0.8
stress
R2A with 3-octanone 15.9309 mM
N.D.
N.D.
N.D.
+0.4
-0.5
stress
R2A with 3-octanone 10.6206 mM
N.D.
N.D.
N.D.
+0.5
-0.5
r2a no stress control
R2A no stress control
N.D.
N.D.
N.D.
+0.5
-0.4
stress
R2A with 3-octanone 10.6206 mM
N.D.
N.D.
N.D.
+0.8
-0.6
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
N.D.
+0.6
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
N.D.
+0.7
-0.5
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
N.D.
+0.6
-0.3
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
N.D.
N.D.
+1.0
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
N.D.
+1.0
-0.5
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
N.D.
+1.1
-0.6
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
N.D.
N.D.
+0.9
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
N.D.
N.D.
+0.9
-0.4
dmso control
DMSO control
N.D.
N.D.
N.D.
+0.8
-0.1
r2a no stress control
R2A no stress control
N.D.
N.D.
N.D.
+0.9
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
N.D.
N.D.
+1.1
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
N.D.
N.D.
N.D.
+1.2
-0.2
r2a no stress control
R2A no stress control
N.D.
N.D.
N.D.
+1.3
+0.0
carbon source
Fumarate (C)
N.D.
N.D.
N.D.
+0.7
+0.6
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